CATH Domain: 2gxqA00 XML data for domain: 2gxqA00

Molscript image for 2gxqA00
2gxqA00
PDB coordinates for domain 2gxqA00

PDB 2gxq, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.300 P-loop containing nucleotide triphosphate hydrolases Gene3D
3.40.50.300.2
3.40.50.300.2.1
3.40.50.300.2.1.1
3.40.50.300.2.1.1.1
3.40.50.300.2.1.1.1.1

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Segment boundaries for domain 2gxqA00

Chopping figure for domain 2gxqA00
DomainStart PDB ResidueStop PDB Residue
2gxqA00 1 207

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.40.50.300.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1q0uB00 87.48 Geobacillus stearothermophilusRNA binding protein 3.40.50.300 202 35 87 2.08 2.37
2pl3A00 86.10 Homo sapiensProbable ATP-dependent RNA helicase DDX10RNA helicase activity 3.40.50.300 232 37 77 1.97 2.54
2oxcA00 85.65 ATP-dependent RNA helicase activityATP-dependent RNA helicase DDX20 [EC:3.6.1.-]Probable ATP-dependent RNA helicase DDX20CytoskeletonHomo sapiens 3.40.50.300 198 25 86 2.64 3.06
1wrbA00 84.62 DjVLGBDugesia japonica 3.40.50.300 232 32 78 2.38 3.05
3fmoB00 84.05 CytoplasmNuclear poreATP-dependent RNA helicase DDX19BRNA bindingHomo sapiens 3.40.50.300 232 30 77 2.57 3.33
1vecA00 80.08 RNA degradationATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.1.-]Probable ATP-dependent RNA helicase DDX6Homo sapiensRNA helicase activity 3.40.50.300 206 23 82 3.82 4.63
1rifA02 79.69 ATP-dependent DNA helicase uvsWEnterobacteria phage T4 3.40.50.300 192 16 91 4.02 4.41
3kqnA01 75.85 Hepatitis C virus (isolate Con1)Genome polyprotein 3.40.50.300 138 17 69 3.26 4.72
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2gxqA00
MEFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTP
TRELALQVASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMG
FEEEVEALLSATPPSRQTLLFSATLPSWAKRLAERYMKNPVLINVIK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2gxqA00
MEFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTP
TRELALQVASELTAVAPHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMG
FEEEVEALLSATPPSRQTLLFSATLPSWAKRLAERYMKNPVLINVIK
BLAST against CATH

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Domain History Events (7)

Domain assigned by auto on 14 Aug 2007 23:13

Assigning to "3.40.50.300" based on similarity with "2gxsB00"

Flow stage update by auto on 14 Aug 2007 22:50

No in_process hits for Domain "2gxqA00" ready to be processed

Flow stage update by auto on 27 Jul 2007 06:26

Domain "2gxqA00" hits Domain "2gxsB00" (100% over 100%) which is currently in process

Flow stage update by auto on 27 Jul 2007 06:26

NW result present for Domain "2gxqA00"

Flow stage update by auto on 16 Jul 2007 22:38

All required files are present for Domain "2gxqA00"

Flow stage update by auto on 14 Jul 2007 06:01

Beginning processing for Domain "2gxqA00"

Insertion by auto on 14 Jul 2007 04:41

Final ChopClose added based on similarity with "2gxuA"