CATH Domain: 2gqwA01 XML data for domain: 2gqwA01

Molscript image for 2gqwA01
2gqwA01
PDB coordinates for domain 2gqwA01

PDB 2gqw, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.50 3-Layer(bba) Sandwich
3.50.50 FAD/NAD(P)-binding domain
3.50.50.60 Gene3D
3.50.50.60.6
3.50.50.60.6.1
3.50.50.60.6.1.1
3.50.50.60.6.1.1.1
3.50.50.60.6.1.1.1.1

Segment boundaries for domain 2gqwA01

Chopping figure for domain 2gqwA01
DomainStart PDB ResidueStop PDB Residue
2gqwA01 6 110
2gqwA01 239 317
2gqwA02 114 236
2gqwA03 318 406

Structural Neighbourhood (18 entries)

There are 18 matching structural neighberhood comparisons for CATH ID 3.50.50.60.6.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 18 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1q1rA01 90.13 Putidaredoxin reductasePseudomonas putida 3.50.50.60 195 38 92 1.84 1.99
1xhcA01 88.98 Pyrococcus furiosusNADH oxidase /nitrite reductase 3.50.50.60 180 27 94 2.15 2.28
1nhpA01 85.58 NADH peroxidaseNADH peroxidase [EC:1.11.1.1]Enterococcus faecalis 3.50.50.60 167 23 87 3.01 3.45
1fcdA01 84.07 Allochromatium vinosumSulfide dehydrogenase [flavocytochrome c] flavoprotein chain 3.50.50.60 188 18 88 3.39 3.82
3fbsB01 83.53 Agrobacterium tumefaciens str. C58Oxidoreductase 3.50.50.60 188 18 84 4.14 4.90
2eq6A01 83.09 Dihydrolipoyl dehydrogenaseCitrate cycle (TCA cycle)Pyruvate metabolismValine, leucine and isoleucine degradationGlycine, serine and threonine metabolism 3.50.50.60 213 20 76 2.79 3.67
1xdiA01 82.22 Citrate cycle (TCA cycle)Valine, leucine and isoleucine degradationPyruvate metabolismGlycine, serine and threonine metabolismMetabolic pathways 3.50.50.60 218 19 74 2.78 3.72
3grsA01 81.95 Glutathione reductase (NADPH) [EC:1.8.1.7]Homo sapiensGlutathione reductase, mitochondrialGlutathione metabolismElectron carrier activity 3.50.50.60 219 15 75 2.94 3.88
1ps9A02 81.55 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]Escherichia coli K-122,4-dienoyl-CoA reductase [NADPH] 3.40.50.720 145 18 73 3.32 4.52
2nvkX01 80.93 Protein homodimerization activityThioredoxin reductase 1, mitochondrialThioredoxin-disulfide reductase activityDetermination of adult lifespanDrosophila melanogaster 3.50.50.60 230 19 72 2.98 4.10
3kkjA01 80.78 Pseudomonas syringae pv. tomatoAmine oxidase, flavin-containing protein 3.50.50.60 150 16 80 3.83 4.78
2iidA02 79.75 Calloselasma rhodostomaL-amino-acid oxidase 3.50.50.60 148 15 75 3.74 4.98
1fecB01 79.63 Trypanothione reductaseCrithidia fasciculata 3.50.50.60 237 19 70 3.04 4.31
2qaeA02 75.36 Dihydrolipoyl dehydrogenaseTrypanosoma cruzi 3.50.50.60 121 9 49 2.47 4.97
2r9zA02 75.01 Marichromatium gracileGlutathione amide reductase 3.50.50.60 118 17 48 2.38 4.90
1xdiA02 74.74 Citrate cycle (TCA cycle)Valine, leucine and isoleucine degradationPyruvate metabolismGlycine, serine and threonine metabolismMetabolic pathways 3.50.50.60 119 15 49 2.35 4.78
1fl2A02 73.78 Alkyl hydroperoxide reductase subunit F [EC:1.6.4.-]Alkyl hydroperoxide reductase subunit FProtein bindingEscherichia coli K-12Cytosol 3.50.50.60 124 11 46 2.24 4.77
1mo9A02 70.27 2-oxopropyl-CoM reductase, carboxylatingXanthobacter autotrophicus Py2 3.50.50.60 135 6 36 1.63 4.47
Displaying entries 1 to 18 (page 1 of 1)


Domain ATOM Sequence

>pdb|2gqwA01
LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSF
DPQAHTVALSDGRTLPYGTLVLATGANDALARAAGLACDDGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSN
AQNQGIAVARHLVDPTAPGYAELP    

Domain COMBS Sequence

>pdb|2gqwA01
MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGV
TAQSFDPQAHTVALSDGRTLPYGTLVLATGANDALARAAGLACDDGIFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERI
ETWSNAQNQGIAVARHLVDPTAPGYAELP    

Domain History Events (6)

Domain assigned by auto on 27 Jul 2007 02:27

Assigning to "3.50.50.60" based on similarity with "1d7yA02"

Flow stage update by auto on 27 Jul 2007 02:24

No in_process hits for Domain "2gqwA01" ready to be processed

Flow stage update by auto on 27 Jul 2007 02:24

NW result present for Domain "2gqwA01"

Flow stage update by auto on 16 Jul 2007 22:38

All required files are present for Domain "2gqwA01"

Flow stage update by auto on 14 Jul 2007 21:06

Beginning processing for Domain "2gqwA01"

Insertion by auto on 14 Jul 2007 20:17

Final ChopClose added based on similarity with "1d7yA"