CATH Domain: 2gmnA00 XML data for domain: 2gmnA00

Molscript image for 2gmnA00
2gmnA00
PDB coordinates for domain 2gmnA00

PDB 2gmn, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.60 4-Layer Sandwich
3.60.15 Metallo-beta-lactamase; Chain A
3.60.15.10 Metallo-beta-lactamase, chain A Gene3D
3.60.15.10.4
3.60.15.10.4.1
3.60.15.10.4.1.1
3.60.15.10.4.1.1.1
3.60.15.10.4.1.1.1.1

[top]
Segment boundaries for domain 2gmnA00

Chopping figure for domain 2gmnA00
DomainStart PDB ResidueStop PDB Residue
2gmnA00 29 292

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.60.15.10.4.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1smlA00 88.51 Stenotrophomonas maltophiliaMetallo-beta-lactamase L1 3.60.15.10 266 31 95 2.18 2.28
2ohhA01 81.02 Type A flavoprotein fprAMethanothermobacter marburgensis str. Marburg 3.60.15.10 252 15 74 3.06 4.12
2q9uB01 81.01 Giardia intestinalisA-type flavoprotein 3.60.15.10 246 14 75 3.11 4.13
1vmeB01 80.54 Thermotoga maritimaPutative uncharacterized protein 3.60.15.10 248 17 75 2.69 3.57
1e5dA02 80.44 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.60.15.10 247 14 73 2.72 3.70
1m2xA00 78.66 Elizabethkingia meningosepticaCarbapenem-hydrolyzing beta-lactamase blaB-1 3.60.15.10 219 12 75 2.81 3.75
1jjeB00 78.29 Pseudomonas aeruginosaBeta-lactamase 3.60.15.10 221 15 75 2.98 3.95
2p97A00 76.40 Anabaena variabilis ATCC 29413Putative uncharacterized protein 3.60.15.10 197 13 65 2.60 3.99
[1]
Displaying entries 1 to 8 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2gmnA00
VAMKKWTAPFEPFQLIDNIYYVGTDGIAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTG
GFAEIKKETGAQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTV
KDGKEDREVLFFCSGTVALNRLVGQPTYAGIVDDYRATFAKAKAMKIDVLLGPHPEVYGMQAKRAEMKDGAPNPFIKPGE
LVTYATSLSEDFDKQLAKQTAALE
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2gmnA00
QTIKDFLAVAMKKWTAPFEPFQLIDNIYYVGTDGIAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNT
HAHLDHTGGFAEIKKETGAQLVAGERDKPLLEGGYYPGDEKNEDLAFPAVKVDRAVKEGDRVTLGDTTLTAHATPGHSPG
CTSWEMTVKDGKEDREVLFFCSGTVALNRLVGQPTYAGIVDDYRATFAKAKAMKIDVLLGPHPEVYGMQAKRAEMKDGAP
NPFIKPGELVTYATSLSEDFDKQLAKQTAALEKK
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 26 Jul 2007 22:47

Assigning to "3.60.15.10" based on similarity with "1jt1A00"

Flow stage update by auto on 26 Jul 2007 22:43

No in_process hits for Domain "2gmnA00" ready to be processed

Flow stage update by auto on 26 Jul 2007 22:43

NW result present for Domain "2gmnA00"

Flow stage update by auto on 14 Jul 2007 06:02

All required files are present for Domain "2gmnA00"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "2gmnA00"

Insertion by auto on 13 Jul 2007 07:48

Final ChopClose added based on similarity with "1jt1A"