CATH Domain: 2gj4A02 XML data for domain: 2gj4A02

Molscript image for 2gj4A02
2gj4A02
PDB coordinates for domain 2gj4A02

PDB 2gj4, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.2000 Glycogen Phosphorylase B; Gene3D
3.40.50.2000.1
3.40.50.2000.1.1
3.40.50.2000.1.1.1
3.40.50.2000.1.1.1.1
3.40.50.2000.1.1.1.1.1

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Segment boundaries for domain 2gj4A02

Chopping figure for domain 2gj4A02
DomainStart PDB ResidueStop PDB Residue
2gj4A01 12 485
2gj4A01 813 835
2gj4A02 486 812

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.50.2000.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2qzsA02 77.50 Metabolic pathwaysStarch and sucrose metabolismGlycogen biosynthetic processStarch synthase activityStarch synthase [EC:2.4.1.21] 3.40.50.2000 210 14 61 2.73 4.46
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2gj4A02
ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV
QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL
ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRG
YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNI
ATSGKFS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2gj4A02
ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV
QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL
ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRG
YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNI
ATSGKFS
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 26 Jul 2007 15:25

Assigning to "3.40.50.2000" based on similarity with "2gpb002"

Flow stage update by auto on 26 Jul 2007 15:20

No in_process hits for Domain "2gj4A02" ready to be processed

Flow stage update by auto on 26 Jul 2007 15:20

NW result present for Domain "2gj4A02"

Flow stage update by auto on 16 Jul 2007 22:38

All required files are present for Domain "2gj4A02"

Flow stage update by auto on 14 Jul 2007 21:06

Beginning processing for Domain "2gj4A02"

Insertion by auto on 14 Jul 2007 20:16

Final ChopClose added based on similarity with "2ffrA"