CATH Domain: 2gf3A02 XML data for domain: 2gf3A02

Molscript image for 2gf3A02
2gf3A02
PDB coordinates for domain 2gf3A02

PDB 2gf3, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.9 D-Amino Acid Oxidase; Chain A, domain 2
3.30.9.10 D-Amino Acid Oxidase, subunit A, domain 2 Gene3D
3.30.9.10.4
3.30.9.10.4.1
3.30.9.10.4.1.1
3.30.9.10.4.1.1.1
3.30.9.10.4.1.1.1.1

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Segment boundaries for domain 2gf3A02

Chopping figure for domain 2gf3A02
DomainStart PDB ResidueStop PDB Residue
2gf3A01 1 59
2gf3A01 149 212
2gf3A01 326 385
2gf3A02 60 145
2gf3A02 213 321

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.30.9.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2uzzA02 89.57 N-methyl-L-tryptophan oxidase [EC:1.5.3.-]N-methyl-L-tryptophan oxidaseEscherichia coli K-12N-methyl-L-amino-acid oxidase activity 3.30.9.10 191 39 96 1.29 1.34
1ryiA02 76.18 Glycine oxidase [EC:1.4.3.19]Thiamine metabolismBacillus subtilisGlycine oxidase 3.30.9.10 140 13 71 2.43 3.41
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2gf3A02
EYVPLALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAI
FEPNSGNLDIPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGV
YPEDESNLRAFLEEYMPGANGELKRGAVCMYTKTL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2gf3A02
EYVPLALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAI
FEPNSGNLDIPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGV
YPEDESNLRAFLEEYMPGANGELKRGAVCMYTKTL
BLAST against CATH

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Domain History Events (7)

Domain assigned by auto on 14 Aug 2007 23:10

Assigning to "3.30.9.10" based on similarity with "1el5A02"

Flow stage update by auto on 14 Aug 2007 22:49

No in_process hits for Domain "2gf3A02" ready to be processed

Flow stage update by auto on 26 Jul 2007 15:20

Domain "2gf3A02" hits Domain "2gf3B02" (100% over 100%) which is currently in process

Flow stage update by auto on 26 Jul 2007 15:20

NW result present for Domain "2gf3A02"

Flow stage update by auto on 16 Jul 2007 22:38

All required files are present for Domain "2gf3A02"

Flow stage update by auto on 14 Jul 2007 06:01

Beginning processing for Domain "2gf3A02"

Insertion by auto on 14 Jul 2007 04:38

Final ChopClose added based on similarity with "1el5A"