CATH Domain: 2g9oA00 XML data for domain: 2g9oA00

Molscript image for 2g9oA00
2g9oA00
PDB coordinates for domain 2g9oA00

PDB 2g9o, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.100 Gene3D
3.30.70.100.16
3.30.70.100.16.1
3.30.70.100.16.1.1
3.30.70.100.16.1.1.1
3.30.70.100.16.1.1.1.1

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Segment boundaries for domain 2g9oA00

Chopping figure for domain 2g9oA00
DomainStart PDB ResidueStop PDB Residue
2g9oA00 1 77

Structural Neighbourhood (97 entries)

There are 97 matching structural neighberhood comparisons for CATH ID 3.30.70.100.16.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 97 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1mwyA00 86.57 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]Detoxification of zinc ionLead, cadmium, zinc and mercury-transporting ATPaseEscherichia coli K-12Response to cadmium ion 3.30.70.100 73 15 93 2.35 2.51
2kt2A00 86.54 Mercuric reductasePseudomonas aeruginosaMercuric reductase [EC:1.16.1.1] 3.30.70.100 69 23 89 2.22 2.48
2ofhX00 83.91 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]Zinc-transporting ATPaseSynechocystis sp. PCC 6803 3.30.70.100 71 25 92 2.53 2.74
2nyiA01 83.67 3.30.70.260 77 12 93 2.99 3.20
2f1fA01 82.16 Valine, leucine and isoleucine biosynthesisMetabolic pathwaysButanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesis 3.30.70.260 79 10 88 3.08 3.48
1in0A01 82.08 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 5 89 3.09 3.45
1y7pB01 81.74 Archaeoglobus fulgidusUncharacterized protein AF_1403 3.30.70.260 80 2 86 2.90 3.36
1utaA00 81.55 Membrane fractionCell cycle cytokinesisCell division protein FtsNCell division protein ftsNProtein binding 3.30.70.1070 77 3 92 3.59 3.89
2rhsD06 81.40 Aminoacyl-tRNA biosynthesisStaphylococcus haemolyticus JCSC1435Phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]Phenylalanyl-tRNA synthetase beta chain 3.30.70.380 88 10 75 2.37 3.16
2x3dF01 81.08 Hypothetical proteinSulfolobus solfataricusPutative uncharacterized protein 3.30.70.1340 84 12 85 3.22 3.76
1u0sA00 81.01 Thermotoga maritimaBacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Protein binding 3.30.70.1110 86 14 82 3.02 3.66
1gmuA01 81.01 Klebsiella aerogenesUrease accessory protein ureE 3.30.70.790 67 4 77 3.21 4.12
1no8A00 80.90 THO complex subunit 4Mus musculusSpliceosomeSingle-stranded DNA bindingRNA binding 3.30.70.330 78 6 91 3.90 4.28
2w25A02 80.58 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory proteinLeucine-responsive regulatory proteinMycobacterium tuberculosis 3.30.70.920 81 12 82 3.24 3.92
1vr6A01 80.57 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysThermotoga maritima3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]Phospho-2-dehydro-3-deoxyheptonate aldolase 3.30.70.1140 75 5 88 3.67 4.16
1konA03 80.40 UPF0082 protein yebCEscherichia coli K-12 3.30.70.980 75 9 85 4.26 4.97
3ce8A00 80.38 Shewanella baltica OS155Putative uncharacterized protein 3.30.70.120 87 14 80 3.97 4.93
1s99A02 80.31 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 81 6 85 4.06 4.77
1earA02 80.26 Sporosarcina pasteuriiUrease accessory protein ureE 3.30.70.790 69 8 79 3.94 4.97
1q5yD00 80.19 CopG family transcriptional regulator, nickel-responsive regulatorNickel-responsive regulatorProtein bindingEscherichia coli K-12 3.30.70.1150 80 10 88 4.23 4.77
1harA02 80.18 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 69 13 84 2.84 3.36
2nzcA00 80.02 Thermotoga maritimaPutative uncharacterized protein 3.30.70.1150 77 7 90 4.16 4.58
2j8sA07 79.93 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1440 94 5 80 3.63 4.49
1vi7A02 79.89 IMPACT family member yigZProtein bindingEscherichia coli K-12 3.30.70.240 71 15 90 3.65 4.01
1eayD00 79.76 Bacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Escherichia coli K-12Chemotaxis protein cheA 3.30.70.400 69 10 89 4.10 4.58
1fjeB01 79.65 NucleolinMesocricetus auratus 3.30.70.330 81 7 87 3.06 3.49
2hiyB01 79.63 Streptococcus pneumoniaePutative uncharacterized protein 3.30.70.1280 87 11 86 3.54 4.11
1s1tA02 79.53 HIV-1 M:B_HXB2RGag-Pol polyprotein 3.30.70.270 93 10 76 3.01 3.94
2pd1A01 79.41 Nitrosomonas europaeaPutative uncharacterized protein 3.30.70.900 93 5 81 3.20 3.92
1lwcB02 79.27 HIV-1 M:B_HXB2RGag-Pol polyprotein 3.30.70.270 87 9 80 3.02 3.75
1cvjA01 79.23 Poly(A) RNA bindingTranslation activator activityProtein C-terminus bindingMRNA polyadenylationPolyadenylate-binding protein 1 3.30.70.330 77 11 84 3.23 3.83
2do0A01 79.12 Protein domain specific bindingIntegral to plasma membraneParaspecklesAlternative nuclear mRNA splicing, via spliceosomeHeterogeneous nuclear ribonucleoprotein M 3.30.70.330 76 7 92 3.94 4.27
2qmwA03 79.11 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysPrephenate dehydratase [EC:4.2.1.51]Similar to chorismate mutaseStaphylococcus aureus subsp. aureus Mu50 3.30.70.260 73 9 83 3.11 3.74
1xxaC00 79.05 Transcriptional regulator of arginine metabolismArginine repressorEscherichia coli K-12Plasmid recombination 3.30.1360.40 73 8 72 3.60 4.95
1xtzA02 79.04 Identical protein bindingNucleusRibose-5-phosphate isomerasePyridoxine biosynthetic processRibose 5-phosphate isomerase A [EC:5.3.1.6] 3.30.70.260 84 7 75 3.22 4.29
2epiB00 79.03 Methanocaldococcus jannaschiiUPF0045 protein MJ1052 3.30.70.930 96 6 73 3.21 4.34
1xmbA02 78.74 Auxin metabolic processArabidopsis thalianaIAA-Ala conjugate hydrolase activityIAA-amino acid hydrolase ILR1-like 2 3.30.70.360 101 14 76 3.26 4.28
1fxlA01 78.73 AU-rich element bindingELAV like protein 2/3/4MRNA processingHomo sapiensELAV-like protein 4 3.30.70.330 71 7 83 3.52 4.24
1x5uA01 78.66 SpliceosomeSpliceosomal complexHomo sapiensSplicing factor 3B subunit 4Splicing factor 3B subunit 4 3.30.70.330 80 10 85 3.49 4.11
3c19A01 78.63 Methanopyrus kandleriUncharacterized conserved protein 3.30.70.1380 98 7 72 3.21 4.43
1dloB02 78.63 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 93 10 77 3.27 4.22
1nm2A01 78.61 Fatty acid biosynthesisStreptomyces coelicolorMalonyl CoA:acyl carrier protein malonyltransferase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Metabolic pathways 3.30.70.250 68 11 79 2.69 3.40
2j8sA03 78.58 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1320 100 7 76 3.37 4.43
1mlaA01 78.55 Fatty acid biosynthesisMetabolic pathwaysMalonyl CoA-acyl carrier protein transacylase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Escherichia coli K-12 3.30.70.250 73 12 84 3.36 3.98
1mw7A03 78.51 Helicobacter pyloriUPF0082 protein HP_0162 3.30.70.980 75 9 89 3.84 4.29
1u8sA02 78.47 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 84 5 90 3.65 4.03
1sc6A03 78.44 Glycine, serine and threonine metabolismMetabolic pathwaysD-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]D-3-phosphoglycerate dehydrogenaseEscherichia coli K-12 3.30.70.260 79 6 86 3.98 4.62
1fxlA02 78.44 AU-rich element bindingELAV like protein 2/3/4MRNA processingHomo sapiensELAV-like protein 4 3.30.70.330 77 9 87 3.84 4.41
1i1gA02 78.43 Pyrococcus furiosusHTH-type transcriptional regulator lrpALrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA 3.30.70.920 77 9 92 4.28 4.64
2fmrA00 78.38 CytoplasmSoluble fractionNucleolusHomo sapiensFragile X mental retardation 1 protein 3.30.1370.10 65 9 77 3.77 4.84
2nuhA00 78.35 Xylella fastidiosaPeriplasmic divalent cation tolerance proteinPeriplasmic divalent cation tolerance protein 3.30.70.830 104 7 68 3.03 4.44
1lfpA03 78.27 UPF0082 protein aq_1575Aquifex aeolicus 3.30.70.980 73 5 81 3.84 4.69
2zfzF00 78.16 Transcriptional regulator of arginine metabolismArginine repressorMycobacterium tuberculosis 3.30.1360.40 76 7 71 3.43 4.80
1nzaA00 78.15 Thermus thermophilus HB8Divalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 103 9 68 3.12 4.53
1nh8A03 78.13 Histidine metabolismMetabolic pathwaysATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Mycobacterium tuberculosis 3.30.70.120 67 7 76 3.45 4.50
1zpvB00 78.03 ACT domain-containing proteinUPF0237 protein SP_0238Streptococcus pneumoniae 3.30.70.260 81 11 91 3.62 3.96
1l3kA02 77.98 Heterogeneous nuclear ribonucleoprotein A1NucleolusProtein bindingCytoplasmSpliceosome 3.30.70.330 78 5 88 4.09 4.62
1x7vC00 77.92 Pseudomonas aeruginosaPutative uncharacterized protein 3.30.70.900 97 9 78 3.80 4.85
2pehA01 77.84 Splicing factor 45SpliceosomeHomo sapiensProtein bindingSplicing factor 45 3.30.70.330 83 6 84 4.14 4.91
1q8bA00 77.83 Bacillus subtilisUncharacterized protein yjcS 3.30.70.900 89 2 84 4.15 4.92
1vjqA00 77.70 3.30.70.340 71 7 77 3.76 4.83
3dlkB02 77.59 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 98 10 74 3.48 4.67
2nyiA02 77.56 3.30.70.260 89 12 82 3.31 4.04
2ia0B02 77.50 Pyrococcus furiosusUncharacterized HTH-type transcriptional regulator PF0864 3.30.70.920 99 18 68 3.21 4.67
1yx2A02 77.40 Nitrogen metabolismAminomethyltransferase [EC:2.1.2.10]One carbon pool by folateBacillus subtilisGlycine, serine and threonine metabolism 3.30.70.1400 81 3 77 3.85 4.95
1l3kA01 77.19 Heterogeneous nuclear ribonucleoprotein A1NucleolusProtein bindingCytoplasmSpliceosome 3.30.70.330 84 9 86 3.78 4.35
2qfjA02 77.18 Homo sapiensPoly(U)-binding-splicing factor PUF60Protein binding 3.30.70.330 87 9 82 3.92 4.74
1kp6A00 77.14 Ustilago maydis virus P6KP6 killer toxin 3.30.70.440 79 5 79 3.71 4.65
3bzqA00 77.09 Two-component systemNitrogen regulatory protein P-II 1Nitrogen regulatory protein P-IIMycobacterium tuberculosis 3.30.70.120 99 5 67 3.27 4.83
1rwuA00 77.09 Hypothetical proteinUPF0250 protein ybeDEscherichia coli K-12 3.30.70.1460 87 10 75 3.67 4.84
1ufwA00 77.05 Phosphatidylinositol signaling systemSynaptojanin-2Phosphatidylinositol-bisphosphatase [EC:3.1.3.36]Homo sapiensInositol phosphate metabolism 3.30.70.330 95 12 76 3.52 4.58
1fjeB02 77.04 NucleolinMesocricetus auratus 3.30.70.330 84 10 79 3.34 4.19
2pn6A02 76.89 150aa long hypothetical transcriptional regulatorSulfolobus tokodaii 3.30.70.920 98 11 72 3.59 4.96
1lfwA02 76.84 Lactobacillus delbrueckii subsp. lactisBeta-Ala-Xaa dipeptidase 3.30.70.360 106 11 69 2.95 4.23
2wriY03 76.70 Thermus thermophilus HB8Elongation factor GElongation factor EF-G [EC:3.6.5.3] 3.30.70.870 76 5 96 3.93 4.09
1lfwA03 76.60 Lactobacillus delbrueckii subsp. lactisBeta-Ala-Xaa dipeptidase 3.30.70.360 88 7 62 3.12 4.99
1b7yB06 76.49 Aminoacyl-tRNA biosynthesisPhenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]Phenylalanyl-tRNA synthetase beta chainThermus thermophilus 3.30.70.380 86 9 76 3.02 3.94
1rk8A00 76.42 SpliceosomeRNA-binding protein 8AMicrotubule cytoskeleton organizationNucleusDrosophila melanogaster 3.30.70.330 87 9 81 3.57 4.37
1kr4A00 76.41 Thermotoga maritimaDivalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 107 7 65 3.15 4.81
2u2fA00 76.24 Splicing factor U2AF 65 kDa subunitSpliceosomeSpliceosomal complexSplicing factor U2AF 65 kDa subunitEnzyme binding 3.30.70.330 85 9 85 4.07 4.74
2vooA02 76.21 TRNA modificationNucleolusMRNA bindingProtein bindingLupus La protein 3.30.70.330 89 10 79 3.62 4.54
1jx4A02 76.10 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]DNA polymerase IVSulfolobus solfataricus 3.30.70.270 96 10 72 3.63 4.98
1kn6A00 76.08 Mus musculusPeptide hormone processingSerine-type endopeptidase activityNeuroendocrine convertase 1Proprotein convertase subtilisin/kexin type 1 [EC:3.4.21.93] 3.30.70.850 73 5 84 3.76 4.45
1cvjG02 76.08 Poly(A) RNA bindingProtein C-terminus bindingTranslation activator activityMRNA polyadenylationPolyadenylate-binding protein 1 3.30.70.330 88 10 82 4.04 4.87
1f0xA01 75.97 Pyruvate metabolismD-lactate dehydrogenaseNAD or NADH bindingEscherichia coli K-12D-lactate dehydrogenase [EC:1.1.1.28] 3.30.70.610 100 5 72 3.10 4.31
2fgcA03 75.87 Butanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesisValine, leucine and isoleucine biosynthesisMetabolic pathways 3.30.70.1150 74 8 84 4.14 4.90
1r31A01 75.87 Pseudomonas mevalonii3-hydroxy-3-methylglutaryl-coenzyme A reductase 3.30.70.420 110 12 67 3.13 4.65
1cg2A02 75.61 Pseudomonas sp. RS-16Carboxypeptidase G2 3.30.70.360 110 6 70 3.44 4.91
1u02A02 75.51 Trehalose-6-phosphate phosphatase related proteinThermoplasma acidophilum 3.30.70.1020 73 5 79 3.87 4.89
2zd1A02 75.41 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 94 3 75 3.67 4.86
1z2lA02 75.01 Purine metabolismZinc ion bindingProtein homodimerization activityAllantoate deiminase [EC:3.5.3.9]Manganese ion binding 3.30.70.360 115 10 66 3.16 4.72
1in0A02 75.01 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.990 92 6 71 3.48 4.85
1sqgA03 74.94 Ribosomal RNA small subunit methyltransferase B [EC:2.1.1.-]Ribosomal RNA small subunit methyltransferase BRRNA (cytosine-C5-)-methyltransferase activityRRNA base methylationEscherichia coli K-12 3.30.70.1170 58 8 74 3.57 4.82
2dy1A03 74.15 Thermus thermophilus HB8Elongation factor EF-G [EC:3.6.5.3]Elongation factor G (EF-G-2) 3.30.70.870 76 6 88 4.25 4.81
2nocA01 73.14 Salmonella entericaPutative periplasmic protein 3.30.70.1310 71 5 63 2.89 4.54
3sxlA02 72.91 Sex differentiationDrosophila melanogasterProtein complexPoly-pyrimidine tract bindingImaginal disc growth 3.30.70.330 55 7 59 2.91 4.87
2hfvA01 72.16 Rhodopseudomonas palustrisPutative uncharacterized protein 3.30.70.790 77 10 84 4.16 4.93
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Displaying entries 1 to 97 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2g9oA00
NDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2g9oA00
NDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEVEIE
GRLEHHHHHH
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 27 Jun 2007 22:22

Assigning to "3.30.70.100" based on similarity with "1s6oA00"

Flow stage update by auto on 27 Jun 2007 22:02

No in_process hits for Domain "2g9oA00" ready to be processed

Flow stage update by auto on 27 Jun 2007 22:02

NW result present for Domain "2g9oA00"

Flow stage update by auto on 27 Jun 2007 18:23

All required files are present for Domain "2g9oA00"

Flow stage update by auto on 27 Jun 2007 14:11

Beginning processing for Domain "2g9oA00"

Insertion by auto on 27 Jun 2007 14:02

Final ChopClose added based on similarity with "1s6oA"