CATH Domain: 2g8mA00 XML data for domain: 2g8mA00

Molscript image for 2g8mA00
2g8mA00
PDB coordinates for domain 2g8mA00

PDB 2g8m, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.572 Thymidylate Synthase; Chain A
3.30.572.10 Thymidylate Synthase, chain A Gene3D
3.30.572.10.1
3.30.572.10.1.1
3.30.572.10.1.1.1
3.30.572.10.1.1.1.1
3.30.572.10.1.1.1.1.1

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Segment boundaries for domain 2g8mA00

Chopping figure for domain 2g8mA00
DomainStart PDB ResidueStop PDB Residue
2g8mA00 2 264

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.30.572.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3ed7A00 89.62 Pyrimidine metabolismThymidylate synthase [EC:2.1.1.45]One carbon pool by folateThymidylate synthaseHomo sapiens 3.30.572.10 284 52 90 2.96 3.28
1bkpA00 88.66 3.30.572.10 278 36 94 2.66 2.82
1b5eA00 82.03 Deoxycytidylate 5-hydroxymethyltransferaseEnterobacteria phage T4 3.30.572.10 241 18 83 3.37 4.05
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2g8mA00
KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWD
EWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSC
QLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLWSNHMDQTHLQLSREPRPLPKLIIKRKPESIFD
YRFEDFEIEGYDPHPGIKAPVAI
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2g8mA00
XKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIW
DEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLWSNHMDQTHLQLSREPRPLPKLIIKRKPESIF
DYRFEDFEIEGYDPHPGIKAPVAI
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 22:07

Assigning to "3.30.572.10" based on similarity with "1f4bA00" (NWSI: 99.2424242424242, NWO: 100, SPS: 96.56, SPO: 100, RMSD: 0.79)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2g8mA00"

Flow stage update by auto on 28 Apr 2006 17:49

All required files are present for Domain "2g8mA00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2g8mA00"

Insertion by auto on 19 Mar 2006 09:25

Final ChopClose added based on similarity with "1f4bA" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 96.56, SI: 99.2424242424242, SO: 100]