CATH Domain: 2g50A02 XML data for domain: 2g50A02

Molscript image for 2g50A02
2g50A02
PDB coordinates for domain 2g50A02

PDB 2g50, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.60 Phosphoenolpyruvate-binding domains Gene3D
3.20.20.60.5
3.20.20.60.5.1
3.20.20.60.5.1.1
3.20.20.60.5.1.1.1
3.20.20.60.5.1.1.1.1

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Segment boundaries for domain 2g50A02

Chopping figure for domain 2g50A02
DomainStart PDB ResidueStop PDB Residue
2g50A01 12 41
2g50A01 385 530
2g50A02 42 115
2g50A02 219 384
2g50A03 116 218

Structural Neighbourhood (41 entries)

There are 41 matching structural neighberhood comparisons for CATH ID 3.20.20.60.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 41 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1u5hA00 82.41 Two-component systemCitrate cycle (TCA cycle)Citrate lyase subunit beta-like proteinCitrate lyase subunit beta [EC:4.1.3.6]Mycobacterium tuberculosis 3.20.20.60 223 11 84 3.02 3.57
1sgjA00 82.26 Citrate cycle (TCA cycle)Two-component systemCitrate lyase subunit beta-like proteinDeinococcus radioduransCitrate lyase subunit beta [EC:4.1.3.6] 3.20.20.60 231 12 90 3.22 3.57
3f4wA00 79.51 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 10 86 3.44 3.97
1xi3A00 79.42 Pyrococcus furiosusThiamine metabolismThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 202 12 81 3.53 4.33
1q6oB00 79.14 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 9 86 3.41 3.96
2fliC00 78.89 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 7 86 3.87 4.47
1tqjC00 78.33 Ribulose-phosphate 3-epimerasePentose phosphate pathwayPentose and glucuronate interconversionsCarbon fixation in photosynthetic organismsRibulose-phosphate 3-epimerase [EC:5.1.3.1] 3.20.20.70 218 9 84 3.55 4.20
1nsjA00 78.18 Thermotoga maritimaN-(5'-phosphoribosyl)anthranilate isomerasePhenylalanine, tyrosine and tryptophan biosynthesisPhosphoribosylanthranilate isomerase [EC:5.3.1.24]Metabolic pathways 3.20.20.70 205 9 82 3.62 4.40
3ctlA00 78.03 [EC:5.1.3.-]D-allulose-6-phosphate 3-epimeraseAllulose 6-phosphate 3-epimerase activityProtein bindingEscherichia coli K-12 3.20.20.70 219 8 85 4.02 4.69
1piiA02 77.89 Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan biosynthesis protein trpCFIndole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]Phosphoribosylanthranilate isomerase activityIndole-3-glycerol-phosphate synthase activity 3.20.20.70 190 9 76 3.61 4.73
1twdB00 77.74 Shigella flexneriCopper homeostasis proteinCopper homeostasis protein cutC 3.20.20.380 226 6 80 3.61 4.48
1dvjA00 77.64 Pyrimidine metabolismMethanothermobacter thermautotrophicus str. Delta HOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23]Metabolic pathways 3.20.20.70 239 8 81 3.15 3.88
1m5wA00 77.59 Vitamin B6 metabolismMetabolic pathwaysPyridoxine 5-phosphate synthase [EC:2.6.99.2]Pyridoxine 5'-phosphate synthasePyridoxine biosynthetic process 3.20.20.70 242 8 81 3.55 4.36
1i4nA00 77.37 Thermotoga maritimaIndole-3-glycerol phosphate synthase 3.20.20.70 251 6 77 3.30 4.27
1n7kA00 77.04 Aeropyrum pernixProbable deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 234 11 80 3.54 4.41
2tpsB00 77.00 Thiamine metabolismBacillus subtilisThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 226 7 78 3.63 4.60
3cu2A00 76.98 Pentose and glucuronate interconversionsPentose phosphate pathwayHaemophilus somnus 129PTRibulose-5-phosphate 3-epimeraseRibulose-phosphate 3-epimerase [EC:5.1.3.1] 3.20.20.70 232 9 85 3.69 4.30
1wa3D00 76.86 Thermotoga maritimaArginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolism 3.20.20.70 203 8 81 3.53 4.36
1xm3B00 76.26 Thiamine metabolismBacillus subtilisThiazole synthaseThiamine biosynthesis ThiGMetabolic pathways 3.20.20.70 244 11 79 3.87 4.87
3ldvA00 76.12 Pyrimidine metabolismMetabolic pathwaysVibrio choleraeOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23] 3.20.20.70 231 10 85 4.01 4.70
1vc4A00 76.08 Indole-3-glycerol phosphate synthase [EC:4.1.1.48]Phenylalanine, tyrosine and tryptophan biosynthesisIndole-3-glycerol phosphate synthaseMetabolic pathwaysThermus thermophilus 3.20.20.70 254 6 76 3.55 4.62
1wx0A00 76.07 Thermus thermophilus HB8Transaldolase [EC:2.2.1.2]Pentose phosphate pathwayMetabolic pathwaysProbable transaldolase 3.20.20.70 211 10 80 3.79 4.73
1ub3A00 76.06 Thermus thermophilus HB8Deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 211 11 78 3.44 4.41
3ceuA00 76.00 Bacteroides thetaiotaomicronThiamine phosphate pyrophosphorylase 3.20.20.70 193 4 75 3.73 4.92
2bg5A00 75.93 Thermoanaerobacter tengcongensisPhosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)Phosphotransferase system (PTS) 3.20.20.60 306 12 63 2.88 4.52
1piiA01 75.85 Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan biosynthesis protein trpCFIndole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]Indole-3-glycerol-phosphate synthase activityPhosphoribosylanthranilate isomerase activity 3.20.20.70 261 9 72 3.47 4.77
1ujpA00 75.80 Thermus thermophilus HB8Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan synthase alpha chain [EC:4.2.1.20]Glycine, serine and threonine metabolismTryptophan synthase alpha chain 3.20.20.70 243 8 78 3.39 4.31
2olsA04 75.77 Neisseria meningitidis serogroup BPhosphoenolpyruvate synthasePyruvate, water dikinase [EC:2.7.9.2]Pyruvate metabolismMetabolic pathways 3.20.20.60 312 11 65 3.13 4.81
2chrA02 75.25 Ralstonia eutropha JMP134Chloromuconate cycloisomeraseToluene and xylene degradationMuconate cycloisomerase [EC:5.5.1.1]Benzoate degradation via hydroxylation 3.20.20.120 202 8 78 3.74 4.79
2yw3E00 75.18 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysThermus thermophilus HB8 3.20.20.70 198 6 78 3.36 4.26
1vcvA00 75.03 Pyrobaculum aerophilumProbable deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 226 9 78 3.34 4.26
1yx1A00 75.02 Pseudomonas aeruginosaKguE 3.20.20.150 248 4 79 3.54 4.46
2qdeA02 74.49 Aromatoleum aromaticum EbN1Mandelate racemase/muconate lactonizing enzyme family protein 3.20.20.120 239 11 82 3.83 4.67
1wbhB00 74.45 Arginine and proline metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysPentose and glucuronate interconversionsPentose phosphate pathway 3.20.20.70 214 9 80 3.58 4.44
1kblA04 74.45 Clostridium symbiosumPyruvate, phosphate dikinase 3.20.20.60 342 15 59 2.89 4.87
1kkoA02 74.33 3-methylaspartate ammonia-lyaseCitrobacter amalonaticus 3.20.20.120 238 10 85 3.91 4.58
1xxxB00 74.28 Metabolic pathwaysLysine biosynthesisDihydrodipicolinate synthase [EC:4.2.1.52]Dihydrodipicolinate synthaseMycobacterium tuberculosis 3.20.20.70 295 7 62 3.09 4.93
1vhcF00 74.17 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysHaemophilus influenzae 3.20.20.70 209 13 79 3.38 4.26
1qwgA00 73.40 Phosphosulfolactate synthasePhosphosulfolactate synthase [EC:4.4.1.19]Methanocaldococcus jannaschii 3.20.20.70 251 6 78 3.78 4.79
3b4uA00 73.16 Dihydrodipicolinate synthase [EC:4.2.1.52]Agrobacterium tumefaciens str. C58Dihydrodipicolinate synthaseLysine biosynthesisMetabolic pathways 3.20.20.70 286 7 64 3.07 4.77
1vr6A02 72.60 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysThermotoga maritima3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]Phospho-2-dehydro-3-deoxyheptonate aldolase 3.20.20.70 268 9 73 3.56 4.84
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Displaying entries 1 to 41 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2g50A02
RNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGAVSEKD
IQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEK
VFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2g50A02
RNTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGAVSEKD
IQDLKFGVEQDVDMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEK
VFLAQKMIIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREA
BLAST against CATH

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Domain History Events (12)

Domain assigned by auto on 19 Dec 2006 11:27

Assigning to "3.20.20.60" based on similarity with "1a49A02"

Flow stage update by auto on 19 Dec 2006 11:27

No in_process hits for Domain "2g50A02" ready to be processed

Update comment by auto on 19 Dec 2006 07:32

Domain "2g50A02" hits Domain "2g50E02" (100% over 100%) which is currently in process

Update comment by auto on 19 Dec 2006 03:32

Domain "2g50A02" hits Domain "2g50B02" (100% over 100%) which is currently in process

Update comment by auto on 18 Dec 2006 23:31

Domain "2g50A02" hits Domain "2g50H02" (100% over 100%) which is currently in process

Update comment by auto on 18 Dec 2006 19:31

Domain "2g50A02" hits Domain "2g50F02" (100% over 100%) which is currently in process

Update comment by auto on 18 Dec 2006 15:31

Domain "2g50A02" hits Domain "2g50D02" (100% over 100%) which is currently in process

Flow stage update by auto on 18 Dec 2006 15:29

Domain "2g50A02" hits Domain "2g50D02" (100% over 100%) which is currently in process

Flow stage update by auto on 18 Dec 2006 15:29

NW result present for Domain "2g50A02"

Flow stage update by auto on 15 Dec 2006 19:31

All required files are present for Domain "2g50A02"

Flow stage update by auto on 14 Dec 2006 19:35

Beginning processing for Domain "2g50A02"

Insertion by auto on 14 Dec 2006 19:28

Final ChopClose added based on similarity with "2g50B"