CATH Domain: 2fydB00 XML data for domain: 2fydB00

Molscript image for 2fydB00
2fydB00
PDB coordinates for domain 2fydB00

PDB 2fyd, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.550 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A
3.90.550.10 Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A Gene3D
3.90.550.10.2
3.90.550.10.2.1
3.90.550.10.2.1.2
3.90.550.10.2.1.2.6
3.90.550.10.2.1.2.6.1

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Segment boundaries for domain 2fydB00

Chopping figure for domain 2fydB00
DomainStart PDB ResidueStop PDB Residue
2fydB00 131 402

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|2fydB00
LTACPEESPLLVGPMLIEFNIPVDLKLVEQQNPKVKLGGRYTPMDCISPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQ
LDYGIYVINQAGESMFNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTYRCFSQPRHISVAMDKFGFSLPYVQYF
GGVSALSKQQFLSINGFPNNYCGWGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRHSRDKKNEPNPQRFDRIAHTKETM
LSDGLNSLTYMVLEVQRYPLYTKITVDIGTCS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2fydB00
ASMTGGQQMGRGSSLTACPEESPLLVGPMLIEFNIPVDLKLVEQQNPKVKLGGRYTPMDCISPHKVAIIIPFRNRQEHLK
YWLYYLHPILQRQQLDYGIYVINQAGESMFNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTYRCFSQPRHISVA
MDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYCGWGGEDDDIYNRLAFRGMSVSRPNAVIGKTRMIRHSRDKKNEPN
PQRFDRIAHTKETMLSDGLNSLTYMVLEVQRYPLYTKITVDIGTCS
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 22:07

Assigning to "3.90.550.10" based on similarity with "1o0rB00" (NWSI: 99.3006993006993, NWO: 100, SPS: 97.32, SPO: 99, RMSD: 0.39)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2fydB00"

Flow stage update by auto on 28 Apr 2006 17:49

All required files are present for Domain "2fydB00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2fydB00"

Insertion by auto on 19 Mar 2006 09:23

Final ChopClose added based on similarity with "1nmmB" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 97.95, SI: 99.3006993006993, SO: 100]