CATH Domain: 2fv7A00 XML data for domain: 2fv7A00

Molscript image for 2fv7A00
2fv7A00
PDB coordinates for domain 2fv7A00

PDB 2fv7, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.1190 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase
3.40.1190.20 Gene3D
3.40.1190.20.16
3.40.1190.20.16.1
3.40.1190.20.16.1.1
3.40.1190.20.16.1.1.1
3.40.1190.20.16.1.1.1.1

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Segment boundaries for domain 2fv7A00

Chopping figure for domain 2fv7A00
DomainStart PDB ResidueStop PDB Residue
2fv7A00 15 322

Structural Neighbourhood (6 entries)

There are 6 matching structural neighberhood comparisons for CATH ID 3.40.1190.20.16.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 6 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tyyB00 86.32 Amino sugar and nucleotide sugar metabolismStarch and sucrose metabolismFructose and mannose metabolismMetabolic pathwaysFructokinase [EC:2.7.1.4] 3.40.1190.20 292 24 88 2.34 2.65
2afbB00 82.74 Thermotoga maritima2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]Pentose phosphate pathwayPentose and glucuronate interconversions2-keto-3-deoxygluconate kinase 3.40.1190.20 319 17 90 3.09 3.40
2i5bA00 79.84 Thiamine metabolismBacillus subtilisPyridoxine kinasePhosphomethylpyrimidine kinase [EC:2.7.4.7]Metabolic pathways 3.40.1190.20 269 12 77 2.84 3.66
2ajrA01 79.78 Thermotoga maritima1-phosphofructokinase [EC:2.7.1.56]Fructose and mannose metabolismSugar kinase, pfkB family 3.40.1190.20 259 16 78 3.11 3.94
1ub0A00 79.35 TransferaseThiamine metabolismHydroxymethylpyrimidine kinase [EC:2.7.1.49]Phosphomethylpyrimidine kinase [EC:2.7.4.7]Metabolic pathways 3.40.1190.20 246 17 75 3.08 4.07
3bf5A01 77.93 Pentose phosphate pathwayRibokinase [EC:2.7.1.15]Thermoplasma acidophilumRibokinase related protein 3.40.1190.20 221 16 69 3.11 4.46
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Displaying entries 1 to 6 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2fv7A00
VAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDIS
TEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKT
LFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHI
PTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPLTLF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2fv7A00
VAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDIS
TEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARRSGVKT
LFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHI
PTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPLTLF
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 26 Aug 2007 18:23

Assigning to "3.40.1190.20" based on similarity with "1vm7A00"

Flow stage update by auto on 26 Aug 2007 18:09

No in_process hits for Domain "2fv7A00" ready to be processed

Flow stage update by auto on 26 Aug 2007 18:09

NW result present for Domain "2fv7A00"

Flow stage update by auto on 21 Aug 2007 10:07

All required files are present for Domain "2fv7A00"

Flow stage update by auto on 20 Aug 2007 17:33

Beginning processing for Domain "2fv7A00"

Insertion by auto on 20 Aug 2007 14:31

Final ChopClose added based on similarity with "1vm7A"