CATH Domain: 2fr5A00 XML data for domain: 2fr5A00

Molscript image for 2fr5A00
2fr5A00
PDB coordinates for domain 2fr5A00

PDB 2fr5, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.140 Cytidine Deaminase; domain 2
3.40.140.10 Cytidine Deaminase, domain 2 Gene3D
3.40.140.10.1
3.40.140.10.1.1
3.40.140.10.1.1.1
3.40.140.10.1.1.1.1
3.40.140.10.1.1.1.1.1

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Segment boundaries for domain 2fr5A00

Chopping figure for domain 2fr5A00
DomainStart PDB ResidueStop PDB Residue
2fr5A00 11 146

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.140.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1r5tB00 93.44 Cytidine deaminasePyrimidine metabolismIdentical protein bindingNucleusCytidine deaminase activity 3.40.140.10 139 36 93 1.16 1.24
3ijfX00 90.32 Pyrimidine metabolismMetabolic pathwaysCytidine deaminaseCytidine deaminase [EC:3.5.4.5]Mycobacterium tuberculosis 3.40.140.10 123 37 88 1.84 2.09
1cttA01 88.17 Pyrimidine metabolismMetabolic pathwaysCytidine deaminaseZinc ion bindingCytidine deaminase activity 3.40.140.10 151 28 82 1.81 2.19
3b8fC00 85.86 Pyrimidine metabolismMetabolic pathwaysBacillus anthracisBlasticidin S deaminase, putativeCytidine deaminase [EC:3.5.4.5] 3.40.140.10 140 16 93 3.56 3.80
1cttA02 85.57 Pyrimidine metabolismMetabolic pathwaysCytidine deaminaseZinc ion bindingCytidine deaminase activity 3.40.140.10 115 22 80 3.95 4.93
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2fr5A00
EPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISEGYKDFRAIAISSD
LQEEFISPCGACRQVMREFGTDWAVYMTKPDGTFVVRTVQELLPASFGPEDLQKIQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2fr5A00
MAQERPSCAVEPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAERTAIQKAISEGYK
DFRAIAISSDLQEEFISPCGACRQVMREFGTDWAVYMTKPDGTFVVRTVQELLPASFGPEDLQKIQ
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 02 Dec 2006 21:20

Assigning to "3.40.140.10" based on similarity with "1zabA00"

Flow stage update by auto on 02 Dec 2006 21:20

No in_process hits for Domain "2fr5A00" ready to be processed

Update comment by auto on 02 Dec 2006 17:20

Domain "2fr5A00" hits Domain "2fr5D00" (100% over 100%) which is currently in process

Flow stage update by auto on 02 Dec 2006 17:18

Domain "2fr5A00" hits Domain "2fr5D00" (100% over 100%) which is currently in process

Flow stage update by auto on 02 Dec 2006 17:18

NW result present for Domain "2fr5A00"

Flow stage update by auto on 30 Nov 2006 17:21

All required files are present for Domain "2fr5A00"

Flow stage update by auto on 29 Nov 2006 13:24

Beginning processing for Domain "2fr5A00"

Insertion by auto on 29 Nov 2006 13:22

Final ChopClose added based on similarity with "1zabA"