CATH Domain: 2fb9A01 XML data for domain: 2fb9A01

Molscript image for 2fb9A01
2fb9A01
PDB coordinates for domain 2fb9A01

PDB 2fb9, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.20 Gene3D
3.40.50.20.4
3.40.50.20.4.1
3.40.50.20.4.1.1
3.40.50.20.4.1.1.1
3.40.50.20.4.1.1.1.1

[top]
Segment boundaries for domain 2fb9A01

Chopping figure for domain 2fb9A01
DomainStart PDB ResidueStop PDB Residue
2fb9A01 1 107
2fb9A02 108 132
2fb9A02 196 322
2fb9A03 135 191

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.40.50.20.4.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e4eA03 86.83 Vancomycin/teicoplanin A-type resistance protein vanAEnterococcus faecium 3.40.50.20 120 30 85 3.71 4.32
1iowA01 86.19 D-Alanine metabolismPeptidoglycan biosynthesisD-alanine--D-alanine ligase BD-alanine-D-alanine ligase [EC:6.3.2.4]Escherichia coli K-12 3.40.50.20 84 36 75 2.05 2.71
2r4qA00 77.51 PTS system fructose-specific EIIABC componentPTS system, fructose-specific IIB component [EC:2.7.1.69]Bacillus subtilisFructose and mannose metabolismPTS system, fructose-specific IIA component [EC:2.7.1.69] 3.40.50.2300 98 7 64 2.95 4.57
2b4aA00 77.37 BH3024 proteinBacillus halodurans 3.40.50.2300 116 7 64 2.73 4.22
2vheA01 77.21 Campylobacter jejuniAcetyltransferase 3.40.50.20 75 6 66 3.31 4.99
3eq2B01 76.73 Pseudomonas aeruginosaProbable two-component response regulator 3.40.50.2300 103 9 66 3.12 4.70
2qr3A00 75.50 Bacteroides fragilisTwo-component system response regulator 3.40.50.2300 119 7 61 2.89 4.71
2q5cA01 74.91 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.2300 97 5 65 3.21 4.91
2qsjB00 74.82 DNA-binding response regulator, LuxR familyRuegeria pomeroyi 3.40.50.2300 122 6 54 2.70 4.99
[1]
Displaying entries 1 to 9 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2fb9A01
MEFMRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPFPPPLSWERYDVV
FPLLHGRFGEDGTVQGFLELLGKPYVG
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2fb9A01
MEFMRVLLIAGGVSPEHEVSLLSAEGVLRHIPFPTDLAVIAQDGRWLLGEKALTALEAKAAPEGEHPFPPPLSWERYDVV
FPLLHGRFGEDGTVQGFLELLGKPYVG
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 25 Jul 2007 14:58

Assigning to "3.40.50.20" based on similarity with "1ehiA01"

Flow stage update by auto on 25 Jul 2007 14:55

No in_process hits for Domain "2fb9A01" ready to be processed

Flow stage update by auto on 25 Jul 2007 14:55

NW result present for Domain "2fb9A01"

Flow stage update by auto on 14 Jul 2007 06:01

All required files are present for Domain "2fb9A01"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "2fb9A01"

Insertion by auto on 13 Jul 2007 05:07

Final ChopClose added based on similarity with "1e4eA"