Domain assigned by cuff on 10 Mar 2008 09:58
same superfamily
CATH Domain: 2f4lA02
2f4lA02
PDB 2f4l, Chain A, Domain 2
| CATH Code | Level Description | Links |
|---|---|---|
 2
| Mainly Beta | |
 2.40
| Beta Barrel | |
 2.40.10
| Thrombin, subunit H | |
 2.40.10.120
| Gene3D | |
 2.40.10.120.3
| ||
 2.40.10.120.3.1
| ||
 2.40.10.120.3.1.1
| ||
 2.40.10.120.3.1.1.1
| ||
 2.40.10.120.3.1.1.1.1
|
Segment boundaries for domain 2f4lA02
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 2f4lA01 | 2 | 76 |
| 2f4lA01 | 120 | 203 |
| 2f4lA02 | 77 | 119 |
| 2f4lA03 | 204 | 283 |
Structural Neighbourhood (0 entries)
Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.
Domain History Events (80)
Domain assignment manual match h by cuff on 10 Mar 2008 09:56
same superfamily
Domain assignment manual match t by tronnberg on 29 Oct 2007 14:20
I am not sure, but the match has similar linkage..
Homcheck review by tronnberg on 29 Oct 2007 14:20
I am not sure, but the match has similar linkage..
Flow stage update by tronnberg on 29 Oct 2007 14:20
I am not sure, but the match has similar linkage..
Homcheck return by cuff on 29 Oct 2007 12:37
I think there is a fold level, not just an architecture level match here - but I dont think its in the architecture 2.20. Have another look
Flow stage update by cuff on 29 Oct 2007 12:37
I think there is a fold level, not just an architecture level match here - but I dont think its in the architecture 2.20. Have another look
Domain assignment manual match a by tronnberg on 07 Sep 2007 10:37
SSAP: 72.21 OV: 47 SEQ: 7. Some similarity between the linkage and structure. Function for query is unknown.
Homcheck review by tronnberg on 07 Sep 2007 10:37
SSAP: 72.21 OV: 47 SEQ: 7. Some similarity between the linkage and structure. Function for query is unknown.
Flow stage update by tronnberg on 07 Sep 2007 10:37
SSAP: 72.21 OV: 47 SEQ: 7. Some similarity between the linkage and structure. Function for query is unknown.
Homcheck allotment by tronnberg on 07 Sep 2007 10:31
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by tronnberg on 07 Sep 2007 10:31
User 'tronnberg' has allocated a domain to themselves for HomChecking with comment : Grabbed this domain via HomCheck's "Get Me A Domain" button.
Flow stage update by auto on 07 Sep 2007 02:19
Domain "2f4lA02" SCOP scan with no results - no SCOP mapping
Domain scan scop cath by auto on 07 Sep 2007 02:18
Adding scan of type "DOMAIN_SCAN_SCOP_CATH" with 0 results for 2f4lA02
Flow stage update by auto on 07 Sep 2007 00:02
Retrieved PRC_PFAMCATH results for job ID SID5126423967065376 and results inserted.
Domain scan prc pfamcath by auto on 07 Sep 2007 00:00
Adding scan of type "DOMAIN_SCAN_PRC_PFAMCATH" with 3 results for 2f4lA02
Update comment by auto on 05 Sep 2007 22:21
PRC_PFAMCATH job SID5126423967065376 is not yet finished.
Flow stage update by auto on 05 Sep 2007 22:15
The entry "2f4lA02" has been submitted to the PRC_PFAMCATH webservice.
Prc pfamcath submit by auto on 05 Sep 2007 22:15
The entry "2f4lA02" has been submitted to the PRC_PFAMCATH webservice.
Flow stage update by auto on 05 Sep 2007 19:12
Retrieved SSAP results for job ID SID8323796383871680 and results inserted.
Domain scan ssap cath by auto on 05 Sep 2007 19:10
Adding scan of type "DOMAIN_SCAN_SSAP_CATH" with 450 results for 2f4lA02
Ssap cath submit by auto on 05 Sep 2007 15:37
The entry "2f4lA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 05 Sep 2007 15:37
The entry "2f4lA02" has been submitted to the SSAP webservice.
Flow stage update by auto on 05 Sep 2007 05:06
Retrieved PRC results for job ID SID2909559965413184 and inserted them into the database.
Domain scan prc cath by auto on 05 Sep 2007 05:05
Adding scan of type "DOMAIN_SCAN_PRC_CATH" with 1 results for 2f4lA02
Prc cath submit by auto on 04 Sep 2007 13:40
The entry "2f4lA02" has been submitted to the PRC webservice.
Flow stage update by auto on 04 Sep 2007 13:40
The entry "2f4lA02" has been submitted to the PRC webservice.
Flow stage update by auto on 04 Sep 2007 11:03
Retrieved HMM(SAM) results for job ID SID0455235693113184 and inserted them into the database.
Domain scan sam cath by auto on 04 Sep 2007 11:02
Adding scan of type "DOMAIN_SCAN_SAM_CATH" with 1 results for 2f4lA02
Sam cath submit by auto on 04 Sep 2007 09:27
The entry "2f4lA02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 04 Sep 2007 09:27
The entry "2f4lA02" has been submitted to the HMM (SAM) webservice.
Flow stage update by auto on 03 Sep 2007 20:43
Retrieved "2f4lA02" CATHEDRAL results for job ID SID7541884921129984 and inserted them into the database.
Domain scan cathedral cath by auto on 03 Sep 2007 20:42
Adding scan of type "DOMAIN_SCAN_CATHEDRAL_CATH" with 228 results for 2f4lA02
Cathedral cath submit by auto on 03 Sep 2007 13:36
The entry "2f4lA02" has been submitted to the CATHEDRAL webservice.
Flow stage update by auto on 03 Sep 2007 13:36
The entry "2f4lA02" has been submitted to the CATHEDRAL webservice.
Flow stage update by auto on 03 Sep 2007 11:28
ScanList with 11099 domains written to "/cath/data/current/scanlists/cathdb_current.fletcher/2f4lA02.scanlist" for "2f4lA02"
Write scan list by auto on 03 Sep 2007 11:28
Writing ScanList containing 11099 domains to file "/cath/data/current/scanlists/cathdb_current.fletcher/2f4lA02.scanlist" for domain "2f4lA02"
Update comment by auto on 03 Sep 2007 10:10
Waiting for 18 new domains (example : 2qg4C01) to be processed so that they can be scanned against too.
Update comment by auto on 03 Sep 2007 06:30
Waiting for 73 new domains (example : 2q3eK03) to be processed so that they can be scanned against too.
Update comment by auto on 03 Sep 2007 02:35
Waiting for 140 new domains (example : 2q08A02) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 22:31
Waiting for 188 new domains (example : 2o3jA01) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 18:19
Waiting for 279 new domains (example : 2b43C04) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 14:20
Waiting for 351 new domains (example : 1sh0B02) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 10:13
Waiting for 431 new domains (example : 1r0kA03) to be processed so that they can be scanned against too.
Update comment by auto on 02 Sep 2007 02:25
Waiting for 551 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 22:10
Waiting for 607 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 18:12
Waiting for 686 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 14:13
Waiting for 771 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 11:39
Waiting for 841 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 06:12
Waiting for 903 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 01 Sep 2007 03:29
Waiting for 969 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 31 Aug 2007 20:04
Waiting for 1085 new domains (example : 1bplB01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Aug 2007 16:14
Waiting for 1046 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Aug 2007 10:10
Waiting for 1038 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Aug 2007 06:30
Waiting for 1087 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 30 Aug 2007 02:34
Waiting for 1146 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Aug 2007 22:14
Waiting for 1197 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Aug 2007 14:41
Waiting for 1257 new domains (example : 1bo5O01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Aug 2007 09:03
Waiting for 1140 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 29 Aug 2007 02:21
Waiting for 1202 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Aug 2007 22:27
Waiting for 1261 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Aug 2007 18:31
Waiting for 1343 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Aug 2007 14:48
Waiting for 1412 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Aug 2007 10:12
Waiting for 1494 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Aug 2007 08:10
Waiting for 1549 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 28 Aug 2007 02:18
Waiting for 1622 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 27 Aug 2007 22:19
Waiting for 1678 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 27 Aug 2007 18:12
Waiting for 1755 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 27 Aug 2007 14:12
Waiting for 1834 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 27 Aug 2007 10:24
Waiting for 1921 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 27 Aug 2007 06:30
Waiting for 1975 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 27 Aug 2007 02:23
Waiting for 2046 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 26 Aug 2007 22:18
Waiting for 2103 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Update comment by auto on 26 Aug 2007 18:24
Waiting for 2173 new domains (example : 1ii8B01) to be processed so that they can be scanned against too.
Flow stage update by auto on 26 Aug 2007 18:23
No satisfactory AssignClose result found.
Flow stage update by auto on 26 Aug 2007 18:09
No in_process hits for Domain "2f4lA02" ready to be processed
Flow stage update by auto on 26 Aug 2007 18:09
NW result present for Domain "2f4lA02"
Flow stage update by auto on 19 Aug 2007 10:12
All required files are present for Domain "2f4lA02"
Flow stage update by auto on 18 Aug 2007 14:31
Beginning processing for Domain "2f4lA02"
Insertion by cuff on 18 Aug 2007 12:35
nice chopping
