CATH Domain: 2f1nA00 XML data for domain: 2f1nA00

Molscript image for 2f1nA00
2f1nA00
PDB coordinates for domain 2f1nA00

PDB 2f1n, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.60 4-Layer Sandwich
3.60.10 Deoxyribonuclease I; Chain A
3.60.10.10 Gene3D
3.60.10.10.5
3.60.10.10.5.1
3.60.10.10.5.1.1
3.60.10.10.5.1.1.1
3.60.10.10.5.1.1.1.1

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Segment boundaries for domain 2f1nA00

Chopping figure for domain 2f1nA00
DomainStart PDB ResidueStop PDB Residue
2f1nA00 -1 251

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.60.10.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1vybA00 78.30 Homo sapiensPutative uncharacterized protein 3.60.10.10 236 11 77 3.57 4.59
1wduB00 77.20 Bombyx moriORF2 3.60.10.10 219 12 74 3.20 4.29
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2f1nA00
GTDLTDFRVATWNLQGASATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSPGIPVRELIWNLSTNSR
PQQVYIYFSAVDALGGRVNLALVSNRRADEVFVLSPVRQGGRPLLGIRIGNDAFFTAHAIAMRNNDAPALVEEVYNFFRD
SRDPVHQALNWMILGDFNREPADLEMNLTVPVRRASEIISPAAATQTSQRTLDYAVAGNSVAFRPSPLQAGIVYGARRTQ
ISSDHFPVGVSRR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2f1nA00
MAHHHHHHVGTDLTDFRVATWNLQGASATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSPGIPVREL
IWNLSTNSRPQQVYIYFSAVDALGGRVNLALVSNRRADEVFVLSPVRQGGRPLLGIRIGNDAFFTAHAIAMRNNDAPALV
EEVYNFFRDSRDPVHQALNWMILGDFNREPADLEMNLTVPVRRASEIISPAAATQTSQRTLDYAVAGNSVAFRPSPLQAG
IVYGARRTQISSDHFPVGVSRR
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Nov 2006 18:36

Assigning to "3.60.10.10" based on similarity with "1sr4B00"

Flow stage update by auto on 28 Nov 2006 18:22

No in_process hits for Domain "2f1nA00" ready to be processed

Flow stage update by auto on 28 Nov 2006 18:22

NW result present for Domain "2f1nA00"

Flow stage update by auto on 28 Nov 2006 18:22

All required files are present for Domain "2f1nA00"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "2f1nA00"

Insertion by cuff on 20 Nov 2006 14:41

good batch of choppings