CATH Domain: 2ef0A01 XML data for domain: 2ef0A01

Molscript image for 2ef0A01
2ef0A01
PDB coordinates for domain 2ef0A01

PDB 2ef0, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1370 Gene3D
3.40.50.1370.10
3.40.50.1370.10.1
3.40.50.1370.10.1.1
3.40.50.1370.10.1.1.1
3.40.50.1370.10.1.1.1.1

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Segment boundaries for domain 2ef0A01

Chopping figure for domain 2ef0A01
DomainStart PDB ResidueStop PDB Residue
2ef0A01 7 136
2ef0A01 288 301
2ef0A02 137 287

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 3.40.50.1370.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3d6nB01 86.59 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Aspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolismMetabolic pathways 3.40.50.1370 147 19 94 3.10 3.28
2fepA01 79.03 Bacillus subtilisCatabolite control protein ALacI family transcriptional regulator 3.40.50.2300 133 10 70 3.12 4.40
2driA01 78.58 Bacterial chemotaxisABC transportersD-ribose-binding periplasmic proteinRibose transport system substrate-binding proteinMembrane 3.40.50.2300 125 12 70 3.53 4.98
3c3kB01 77.92 Actinobacillus succinogenes 130ZAlanine racemase 3.40.50.2300 134 10 70 3.18 4.49
8abpA01 77.75 ABC transportersL-arabinose-binding periplasmic proteinL-arabinose transport system substrate-binding proteinEscherichia coli K-12 3.40.50.2300 138 9 70 3.29 4.69
2fvyA01 77.62 Bacterial chemotaxisABC transportersMethyl-galactoside transport system substrate-binding proteinD-galactose-binding periplasmic proteinEscherichia coli K-12 3.40.50.2300 147 9 69 3.24 4.67
3ctpA01 77.32 Alkaliphilus metalliredigens QYMFPeriplasmic binding protein/LacI transcriptional regulator 3.40.50.2300 128 12 68 3.41 4.96
1dbqA01 77.25 LacI family transcriptional regulator, purine nucleotide synthesis repressorHTH-type transcriptional repressor purREscherichia coli K-12 3.40.50.2300 134 12 70 3.13 4.46
1jyeA01 77.22 Lactose operon repressorProtein bindingEscherichia coli K-12Cytosol 3.40.50.2300 130 11 71 3.50 4.89
2qu7A01 76.94 Putative transcriptional regulatorStaphylococcus saprophyticus subsp. saprophyticus ATCC 15305 3.40.50.2300 129 8 70 3.48 4.91
1a04A01 76.07 Two-component systemTwo-component system, NarL family, nitrate/nitrite response regulator NarLProtein bindingEscherichia coli K-12Nitrate/nitrite response regulator protein narL 3.40.50.2300 124 6 65 3.25 4.93
3bblA01 75.88 Chloroflexus aggregans DSM 9485LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupGTranscriptional regulator, LacI family 3.40.50.2300 136 6 69 3.29 4.74
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2ef0A01
TLPKDLLDFSGYGPKELQALLDLAEQLKRERYRGEDLKGKVLALLFEKPSLRTRTTLEVAMVHLGGHAVYLDQKQVGIGE
REPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVVNALSDRAHPLRLHTAKAVLLTLLK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ef0A01
MGGEALTLPKDLLDFSGYGPKELQALLDLAEQLKRERYRGEDLKGKVLALLFEKPSLRTRTTLEVAMVHLGGHAVYLDQK
QVGIGEREPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVVNALSDRAHPLRLHTAKAVLLTLLK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 24 Jul 2007 14:46

Assigning to "3.40.50.1370" based on similarity with "1pvvA01"

Flow stage update by auto on 24 Jul 2007 14:42

No in_process hits for Domain "2ef0A01" ready to be processed

Flow stage update by auto on 24 Jul 2007 14:42

NW result present for Domain "2ef0A01"

Flow stage update by auto on 14 Jul 2007 06:02

All required files are present for Domain "2ef0A01"

Flow stage update by auto on 13 Jul 2007 18:42

Beginning processing for Domain "2ef0A01"

Insertion by auto on 13 Jul 2007 15:05

Final ChopClose added based on similarity with "1pvvA"