CATH Domain: 2drpA02 XML data for domain: 2drpA02

Molscript image for 2drpA02
2drpA02
PDB coordinates for domain 2drpA02

PDB 2drp, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.160 Double Stranded RNA Binding Domain
3.30.160.60 Classic Zinc Finger Gene3D
3.30.160.60.14
3.30.160.60.14.1
3.30.160.60.14.1.1
3.30.160.60.14.1.1.1
3.30.160.60.14.1.1.1.1

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Segment boundaries for domain 2drpA02

Chopping figure for domain 2drpA02
DomainStart PDB ResidueStop PDB Residue
2drpA01 103 136
2drpA02 137 165

Structural Neighbourhood (17 entries)

There are 17 matching structural neighberhood comparisons for CATH ID 3.30.160.60.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 17 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2adrA01 90.74 NucleusRegulation of carbohydrate metabolic processPeroxisome organizationNegative regulation of transcription from RNA polymerase II promoter by glucoseRegulatory protein ADR1 3.30.160.60 29 17 93 1.65 1.77
1tf3A01 89.70 Xenopus laevisTranscription factor IIIA 3.30.160.60 30 24 93 1.62 1.74
1x5wA01 89.66 Homo sapiensZinc finger protein 64 homolog, isoforms 1 and 2 3.30.160.60 28 21 93 1.93 2.07
1tf6A02 88.83 Xenopus laevisTranscription factor IIIA 3.30.160.60 29 31 93 2.08 2.23
1tf6A04 88.44 Xenopus laevisTranscription factor IIIA 3.30.160.60 30 31 86 1.47 1.70
1bboA02 88.06 DNA bindingZinc finger protein 40NucleusHomo sapiensHuman immunodeficiency virus type I enhancer-binding protein 3.30.160.60 31 37 90 1.79 1.98
1un6D02 87.55 Xenopus laevisTranscription factor IIIA 3.30.160.60 31 24 87 1.40 1.61
1tf6A03 87.16 Xenopus laevisTranscription factor IIIA 3.30.160.60 34 34 85 2.27 2.66
1pjqA02 81.14 Porphyrin and chlorophyll metabolismSalmonella enterica subsp. enterica serovar TyphimuriumSiroheme synthaseUroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]Metabolic pathways 3.30.160.110 35 0 74 1.72 2.32
1llmD02 79.64 Early growth response protein 1Prion diseasesPositive regulation of RNA polymerase II transcriptional preinitiation complex assemblyResponse to insulin stimulusNegative regulation of transcription from RNA polymerase II promoter 3.30.160.60 55 27 47 0.50 1.06
3bidA01 79.54 Neisseria meningitidis serogroup BUPF0339 protein NMB1088 3.30.160.160 46 17 63 2.05 3.25
2b0uC03 78.68 Homo sapiensNegative regulation of transcription from RNA polymerase II promoterFollistatinPositive regulation of hair follicle developmentActivin binding 3.30.60.30 41 52 68 2.03 2.97
1fy7A01 77.15 NuA4 histone acetyltransferase complexHistone acetyltransferase HTATIP [EC:2.3.1.48]Chromatin silencing at rDNATranscription elongation, DNA-dependentPiccolo NuA4 histone acetyltransferase complex 3.30.60.60 53 17 52 1.64 3.10
1bbgA00 76.15 Pollen allergen Amb t 5Ambrosia trifida 3.30.160.80 40 13 62 2.72 4.35
1ncsA00 75.54 Regulation of transcription involved in G1 phase of mitotic cell cycleNucleusProtein bindingTranscriptional factor SWI5Cytoplasm 3.30.160.60 47 31 61 2.31 3.74
1kyqA02 73.65 Identical protein bindingPrecorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:1.3.1.76 4.99.1.4]Siroheme biosynthetic processMetabolic pathwaysPrecorrin-2 dehydrogenase activity 3.30.160.110 37 3 70 3.02 4.30
2jyaA00 68.08 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.30.160.190 80 13 36 1.67 4.61
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Displaying entries 1 to 17 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2drpA02
NVKVYPCPFCFKEFTRKDNMTAHVKIIHK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2drpA02
NVKVYPCPFCFKEFTRKDNMTAHVKIIHKI
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:01

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:01

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:54

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"