CATH Domain: 2ddhA03 XML data for domain: 2ddhA03

Molscript image for 2ddhA03
2ddhA03
PDB coordinates for domain 2ddhA03

PDB 2ddh, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.20 Up-down Bundle
1.20.140 Butyryl-CoA Dehydrogenase, subunit A; domain 3
1.20.140.10 Butyryl-CoA Dehydrogenase, subunit A, domain 3 Gene3D
1.20.140.10.7
1.20.140.10.7.1
1.20.140.10.7.1.1
1.20.140.10.7.1.1.1
1.20.140.10.7.1.1.1.1

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Segment boundaries for domain 2ddhA03

Chopping figure for domain 2ddhA03
DomainStart PDB ResidueStop PDB Residue
2ddhA01 15 133
2ddhA02 134 266
2ddhA03 280 446
2ddhA04 480 611

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 1.20.140.10.7.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ivhA03 87.61 Isovaleryl-CoA dehydrogenase, mitochondrialHomo sapiens 1.20.140.10 141 17 88 1.72 1.94
2uxwA01 85.82 Fatty acid metabolismEnergy derivation by oxidation of organic compoundsMitochondrial nucleoidMetabolic pathwaysVery long-chain specific acyl-CoA dehydrogenase, mitochondrial 1.20.140.10 186 18 80 2.11 2.63
1jq0A00 70.79 Simian immunodeficiency virusEnvelope glycoprotein 1.10.287.210 71 2 39 1.95 4.94
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2ddhA03
FVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRSELPE
LHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ddhA03
FVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESI
GQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIY
DQVRSGK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 23 Jul 2007 10:53

Assigning to "1.20.140.10" based on similarity with "1is2B03"

Flow stage update by auto on 23 Jul 2007 10:50

No in_process hits for Domain "2ddhA03" ready to be processed

Flow stage update by auto on 23 Jul 2007 10:50

NW result present for Domain "2ddhA03"

Flow stage update by auto on 16 Jul 2007 22:38

All required files are present for Domain "2ddhA03"

Flow stage update by auto on 14 Jul 2007 17:56

Beginning processing for Domain "2ddhA03"

Insertion by auto on 14 Jul 2007 16:23

Final ChopClose added based on similarity with "1is2A"