CATH Domain: 2ddfA00 XML data for domain: 2ddfA00

Molscript image for 2ddfA00
2ddfA00
PDB coordinates for domain 2ddfA00

PDB 2ddf, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.390 Collagenase (Catalytic Domain)
3.40.390.10 Collagenase (Catalytic Domain) Gene3D
3.40.390.10.12
3.40.390.10.12.1
3.40.390.10.12.1.1
3.40.390.10.12.1.1.1
3.40.390.10.12.1.1.1.1

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Segment boundaries for domain 2ddfA00

Chopping figure for domain 2ddfA00
DomainStart PDB ResidueStop PDB Residue
2ddfA00 218 474

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|2ddfA00
PDPMKNTCKLLVVADHRFYRYMGRGEESTTTNYLIELIDRVDDIYRNTAWDNAGFKGYGIQIEQIRILKSPQEVKPGEKH
YNMAKSYPNEEKDAWDVKMLLEQFSFDIAEEASKVCLAHLFTYQDFDMGTLGLAYGGSPHGGVCPKAYYSPVGKKNIYLN
SGLTSTKNYGKTILTKEADLVTTHELGHNFGAEHDPDGLAECAPNEDQGGKYVMYPIAVSGDHENNKMFSQCSKQSIYKT
IESKAQECFQERS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ddfA00
PDPMKNTCKLLVVADHRFYRYMGRGEESTTTNYLIELIDRVDDIYRNTAWDNAGFKGYGIQIEQIRILKSPQEVKPGEKH
YNMAKSYPNEEKDAWDVKMLLEQFSFDIAEEASKVCLAHLFTYQDFDMGTLGLAYGGSPRANSHGGVCPKAYYSPVGKKN
IYLNSGLTSTKNYGKTILTKEADLVTTHELGHNFGAEHDPDGLAECAPNEDQGGKYVMYPIAVSGDHENNKMFSQCSKQS
IYKTIESKAQECFQERS
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 22:06

Assigning to "3.40.390.10" based on similarity with "1bkcA00" (NWSI: 99.6078431372549, NWO: 99.2217898832685, SPS: 95.50, SPO: 98, RMSD: 1.46)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2ddfA00"

Flow stage update by auto on 28 Apr 2006 17:49

All required files are present for Domain "2ddfA00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2ddfA00"

Insertion by auto on 18 Mar 2006 10:14

Final ChopClose added based on similarity with "1bkcA" [LEE: 1, LME: 0, MR: 0, LG: 4, SS: 95.50, SI: 99.6078431372549, SO: 99.2217898832685]