CATH Domain: 2dclA00 XML data for domain: 2dclA00

Molscript image for 2dclA00
2dclA00
PDB coordinates for domain 2dclA00

PDB 2dcl, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.120 Gene3D
3.30.70.120.2
3.30.70.120.2.1
3.30.70.120.2.1.1
3.30.70.120.2.1.1.1
3.30.70.120.2.1.1.1.1

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Segment boundaries for domain 2dclA00

Chopping figure for domain 2dclA00
DomainStart PDB ResidueStop PDB Residue
2dclA00 2 114

Structural Neighbourhood (41 entries)

There are 41 matching structural neighberhood comparisons for CATH ID 3.30.70.120.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 41 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3ce8A00 82.76 Shewanella baltica OS155Putative uncharacterized protein 3.30.70.120 87 10 81 2.12 2.59
1nzaA00 82.54 Thermus thermophilus HB8Divalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 103 13 84 3.62 4.29
2gx8C02 82.40 Bacillus cereus ATCC 14579NIF3-related protein 3.30.70.830 102 9 82 3.22 3.91
2nuhA00 82.27 Xylella fastidiosaPeriplasmic divalent cation tolerance proteinPeriplasmic divalent cation tolerance protein 3.30.70.830 104 9 84 3.64 4.30
3c19A01 81.36 Methanopyrus kandleriUncharacterized conserved protein 3.30.70.1380 98 12 89 3.33 3.70
1u8sA01 80.76 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 86 12 81 3.98 4.86
1y7pB01 80.44 Archaeoglobus fulgidusUncharacterized protein AF_1403 3.30.70.260 80 16 78 2.86 3.63
1q5yD00 80.29 CopG family transcriptional regulator, nickel-responsive regulatorNickel-responsive regulatorProtein bindingEscherichia coli K-12 3.30.70.1150 80 6 76 3.23 4.21
2pd1A01 80.18 Nitrosomonas europaeaPutative uncharacterized protein 3.30.70.900 93 6 80 3.51 4.34
1kr4A00 80.15 Thermotoga maritimaDivalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 107 8 84 3.75 4.46
2bopA00 79.98 Regulatory protein E2Bovine papillomavirus type 1 3.30.70.330 85 7 75 3.37 4.45
1xmbA02 79.98 Auxin metabolic processArabidopsis thalianaIAA-Ala conjugate hydrolase activityIAA-amino acid hydrolase ILR1-like 2 3.30.70.360 101 10 77 3.75 4.86
1in0A01 79.98 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 12 65 2.43 3.70
2bbeA00 79.65 Shewanella oneidensisPutative uncharacterized protein 3.30.70.900 92 2 86 4.24 4.88
2vd3A03 79.31 Methanothermobacter thermautotrophicus str. Delta HATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Histidine metabolismMetabolic pathways 3.30.70.120 74 13 73 2.45 3.32
1nm2A01 79.20 Fatty acid biosynthesisStreptomyces coelicolorMalonyl CoA:acyl carrier protein malonyltransferase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Metabolic pathways 3.30.70.250 68 11 68 2.64 3.84
1vi7A02 78.98 IMPACT family member yigZProtein bindingEscherichia coli K-12 3.30.70.240 71 4 70 2.86 4.04
1qm9A02 78.81 Polypyrimidine tract-binding protein 1Poly-pyrimidine tract bindingHeterogeneous nuclear ribonucleoprotein complexMRNA processingNucleolus 3.30.70.330 89 2 77 3.36 4.32
2fb0A00 78.74 Bacteroides thetaiotaomicronPutative uncharacterized protein 3.30.70.900 91 6 81 3.79 4.63
1u7lA01 78.60 V-type H+-transporting ATPase subunit C [EC:3.6.3.14]Oxidative phosphorylationVacuolar acidificationProtein bindingVacuolar proton-transporting V-type ATPase, V1 domain 3.30.70.1180 91 7 78 3.22 4.09
1nh8A03 78.58 Histidine metabolismMetabolic pathwaysATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Mycobacterium tuberculosis 3.30.70.120 67 7 66 2.41 3.62
2f1fA01 78.48 Valine, leucine and isoleucine biosynthesisMetabolic pathwaysButanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesis 3.30.70.260 79 6 77 3.41 4.38
1u8sA02 78.41 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 84 8 76 2.94 3.83
2qmxA03 78.32 Prephenate dehydratase [EC:4.2.1.51]Phenylalanine, tyrosine and tryptophan biosynthesisChlorobaculum tepidumMetabolic pathwaysPrephenate dehydratase 3.30.70.260 90 4 86 4.26 4.90
2rhsD06 78.11 Aminoacyl-tRNA biosynthesisStaphylococcus haemolyticus JCSC1435Phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]Phenylalanyl-tRNA synthetase beta chain 3.30.70.380 88 5 71 3.27 4.56
2ivyA01 78.09 Sulfolobus solfataricusPutative uncharacterized protein 3.30.70.240 74 12 64 2.75 4.25
1mlaA01 78.07 Fatty acid biosynthesisMetabolic pathwaysMalonyl CoA-acyl carrier protein transacylase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Escherichia coli K-12 3.30.70.250 73 12 69 2.60 3.73
1uw4A00 77.91 Regulator of nonsense transcripts 3BNuclear-transcribed mRNA catabolic process, nonsense-mediated decayHomo sapiensProtein binding 3.30.70.330 90 6 80 4.00 4.95
3c6kA01 77.90 Spermine synthaseArginine and proline metabolismSpermine synthase [EC:2.5.1.22]Glutathione metabolismMetabolic pathways 3.30.160.110 94 12 62 2.56 4.09
1konA03 77.88 UPF0082 protein yebCEscherichia coli K-12 3.30.70.980 75 13 71 3.47 4.84
2i0xA01 77.66 Pyrococcus furiosusPutative uncharacterized protein 3.30.70.240 66 9 62 2.57 4.10
1eayD00 77.48 Bacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Escherichia coli K-12Chemotaxis protein cheA 3.30.70.400 69 13 67 3.03 4.48
1s99A01 77.13 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 77 5 72 3.36 4.62
1mw7A03 77.01 Helicobacter pyloriUPF0082 protein HP_0162 3.30.70.980 75 6 74 3.44 4.60
1j4wA01 76.41 Transcription from RNA polymerase II promoterFar upstream element-binding proteinSequence-specific DNA binding transcription factor activityFar upstream element-binding protein 1Nucleus 3.30.1370.10 74 5 67 3.35 4.95
1wj9A01 76.13 Thermus thermophilus HB8Putative uncharacterized protein TTHB192 3.30.70.1200 87 9 75 3.46 4.57
2qmwA03 75.81 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysPrephenate dehydratase [EC:4.2.1.51]Similar to chorismate mutaseStaphylococcus aureus subsp. aureus Mu50 3.30.70.260 73 10 70 3.14 4.44
1utaA00 75.55 Membrane fractionCell cycle cytokinesisCell division protein FtsNCell division protein ftsNProtein binding 3.30.70.1070 77 7 75 3.55 4.69
2nyiA01 75.53 3.30.70.260 77 9 77 3.87 4.98
1vlyA02 74.81 RNA modificationTRNA-modifying protein ygfZFolic acid bindingEscherichia coli K-12 3.30.70.1400 84 8 65 3.07 4.68
1o8bA02 74.65 Pentose phosphate pathwayMetabolic pathwaysRibose 5-phosphate isomerase A [EC:5.3.1.6]Escherichia coli K-12Ribose-5-phosphate isomerase A 3.30.70.260 69 11 69 3.38 4.85
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Displaying entries 1 to 41 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2dclA00
VEVEHWNTLRLRIYIGENDKWEGRPLYKVIVEKLREMGIAGATVYRGIYGFGTDLPIIVEVVDRGHNIEKVVNVIKPMIK
DGMITVEPTIVLWVGTQEE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2dclA00
MVEVEHWNTLRLRIYIGENDKWEGRPLYKVIVEKLREMGIAGATVYRGIYGFGKKSRVHSSDVIRLSTDLPIIVEVVDRG
HNIEKVVNVIKPMIKDGMITVEPTIVLWVGTQEEIKKFEEDAIAERQ
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 27 Jun 2007 22:21

Assigning to "3.30.70.120" based on similarity with "1o2cA00"

Flow stage update by auto on 27 Jun 2007 18:23

No in_process hits for Domain "2dclA00" ready to be processed

Flow stage update by auto on 27 Jun 2007 18:23

NW result present for Domain "2dclA00"

Flow stage update by auto on 27 Jun 2007 18:23

All required files are present for Domain "2dclA00"

Flow stage update by auto on 27 Jun 2007 14:11

Beginning processing for Domain "2dclA00"

Insertion by auto on 27 Jun 2007 14:01

Final ChopClose added based on similarity with "1o2cA"