CATH Domain: 2cz9A01 XML data for domain: 2cz9A01

Molscript image for 2cz9A01
2cz9A01
PDB coordinates for domain 2cz9A01

PDB 2cz9, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.230 Ribosomal Protein S5; domain 2
3.30.230.10 Gene3D
3.30.230.10.14
3.30.230.10.14.1
3.30.230.10.14.1.1
3.30.230.10.14.1.1.1
3.30.230.10.14.1.1.1.1

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Segment boundaries for domain 2cz9A01

Chopping figure for domain 2cz9A01
DomainStart PDB ResidueStop PDB Residue
2cz9A01 1 175
2cz9A02 176 350

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.30.230.10.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1pieA01 89.86 Amino sugar and nucleotide sugar metabolismGalactose metabolismMetabolic pathwaysLactococcus lactis subsp. lactisGalactokinase [EC:2.7.1.6] 3.30.230.10 211 45 82 1.00 1.21
1kkhA01 85.89 Terpenoid backbone biosynthesisMethanocaldococcus jannaschiiMevalonate kinaseMevalonate kinase [EC:2.7.1.36]Metabolic pathways 3.30.230.10 181 20 92 2.36 2.54
1kvkA01 79.97 Terpenoid backbone biosynthesisPeroxisomeRattus norvegicusSoluble fractionIsopentenyl diphosphate biosynthetic process, mevalonate pathway 3.30.230.10 230 20 73 3.58 4.84
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2cz9A01
MIKVKSPGRVNLIGEHTDYTYGYVMPMAINLYTKIEAEKHGEVILYSEHFGEERKFSLNDLRKENSWIDYVKGIFWVLKE
SDYEVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGN
VIFLDTHTLDYEYIP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2cz9A01
MIKVKSPGRVNLIGEHTDYTYGYVMPMAINLYTKIEAEKHGEVILYSEHFGEERKFSLNDLRKENSWIDYVKGIFWVLKE
SDYEVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGN
VIFLDTHTLDYEYIP
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 07 Dec 2006 05:31

Assigning to "3.30.230.10" based on similarity with "1s4eA01"

Flow stage update by auto on 07 Dec 2006 05:26

No in_process hits for Domain "2cz9A01" ready to be processed

Flow stage update by auto on 07 Dec 2006 05:26

NW result present for Domain "2cz9A01"

Flow stage update by auto on 06 Dec 2006 17:23

All required files are present for Domain "2cz9A01"

Flow stage update by auto on 05 Dec 2006 17:30

Beginning processing for Domain "2cz9A01"

Insertion by cuff on 05 Dec 2006 16:15

small batch of throughly checked choppings