CATH Domain: 2cvzA01 XML data for domain: 2cvzA01

Molscript image for 2cvzA01
2cvzA01
PDB coordinates for domain 2cvzA01

PDB 2cvz, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.720 NAD(P)-binding Rossmann-like Domain Gene3D
3.40.50.720.117
3.40.50.720.117.1
3.40.50.720.117.1.1
3.40.50.720.117.1.1.1
3.40.50.720.117.1.1.1.1

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Segment boundaries for domain 2cvzA01

Chopping figure for domain 2cvzA01
DomainStart PDB ResidueStop PDB Residue
2cvzA01 2 157
2cvzA02 158 289

Structural Neighbourhood (25 entries)

There are 25 matching structural neighberhood comparisons for CATH ID 3.40.50.720.117.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 25 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3ckyA01 91.09 Eubacterium barkeri2-hydroxymethyl glutarate dehydrogenase 3.40.50.720 163 37 93 1.31 1.40
1i36A01 83.86 Methanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.50.720 159 16 91 2.48 2.72
2rcyA01 83.04 Arginine and proline metabolismMetabolic pathwaysPlasmodium falciparum 3D7Pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2] 3.40.50.720 148 12 86 2.45 2.84
2amfA01 82.50 Arginine and proline metabolismMetabolic pathwaysPutative pyrroline carboxylate reductasePyrroline-5-carboxylate reductase [EC:1.5.1.2]Streptococcus pyogenes serotype M1 3.40.50.720 148 14 90 2.47 2.74
3d1lB01 82.29 Bacteroides fragilis NCTC 9343Putative uncharacterized protein 3.40.50.720 151 15 89 2.60 2.90
2pv7A01 80.93 T-proteinNovobiocin biosynthesisHaemophilus influenzaePhenylalanine, tyrosine and tryptophan biosynthesisPrephenate dehydrogenase [EC:1.3.1.12] 3.40.50.720 154 20 85 3.39 3.96
1o6zA02 80.43 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiMetabolic pathways 3.40.50.720 142 9 71 2.41 3.38
1ur5C01 80.41 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 10 72 2.41 3.32
3d0oA01 79.57 Pyruvate metabolismPropanoate metabolismMetabolic pathwaysCysteine and methionine metabolismGlycolysis / Gluconeogenesis 3.40.50.720 143 9 71 2.57 3.57
1hyhA01 79.28 Weissella confusaL-2-hydroxyisocaproate dehydrogenase 3.40.50.720 141 14 73 2.71 3.70
1xeaA01 79.15 Vibrio choleraeOxidoreductase, Gfo/Idh/MocA familyVirulence factor 3.40.50.720 117 12 68 2.49 3.63
2eggA02 79.11 Shikimate 5-dehydrogenase [EC:1.1.1.25]Geobacillus kaustophilusPhenylalanine, tyrosine and tryptophan biosynthesisShikimate 5-dehydrogenaseMetabolic pathways 3.40.50.720 140 17 69 2.41 3.48
2i76A01 79.00 Thermotoga maritimaPutative uncharacterized protein 3.40.50.720 142 17 89 3.32 3.71
1hyeA01 78.07 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.40.50.720 147 12 73 2.99 4.08
1pl8A02 77.65 Membrane fractionZinc ion bindingL-iditol 2-dehydrogenase [EC:1.1.1.14]Sorbitol catabolic processGlucose metabolic process 3.40.50.720 139 11 69 3.16 4.52
2aefA01 77.33 Methanothermobacter thermautotrophicus str. Delta HCalcium-gated potassium channel mthK 3.40.50.720 115 13 66 2.40 3.60
1lluA02 77.24 Tyrosine metabolismFatty acid metabolism1- and 2-Methylnaphthalene degradationMetabolic pathwaysMetabolism of xenobiotics by cytochrome P450 3.40.50.720 138 13 69 3.29 4.70
1h2bA02 77.16 Tyrosine metabolismFatty acid metabolism1- and 2-Methylnaphthalene degradationMetabolic pathwaysAeropyrum pernix 3.40.50.720 140 10 66 2.85 4.28
3ff4A00 77.06 Cytophaga hutchinsonii ATCC 33406Putative uncharacterized protein 3.40.50.720 119 11 71 3.39 4.76
1piwA02 76.93 NADP-dependent alcohol dehydrogenase 6Alcohol dehydrogenase (NADP+) activityAlcohol metabolic processHydroxymethylfurfural reductase (NADH) activitySoluble fraction 3.40.50.720 137 13 71 3.16 4.44
2ho3A01 76.51 Oxidoreductase, Gfo/Idh/MocA familyStreptococcus pneumoniae 3.40.50.720 113 14 64 2.71 4.19
1ydwA01 76.00 Arabidopsis thalianaUncharacterized oxidoreductase At4g09670 3.40.50.720 124 12 71 2.93 4.11
1li4A02 75.91 Selenoamino acid metabolismMetabolic pathwaysCysteine and methionine metabolismAdenosylhomocysteinaseAdenosylhomocysteinase [EC:3.3.1.1] 3.40.50.720 160 10 70 3.20 4.57
1f8fA02 75.90 Acinetobacter calcoaceticusBenzyl alcohol dehydrogenase 3.40.50.720 137 8 69 3.44 4.92
3a06B01 75.34 Terpenoid backbone biosynthesisThermotoga maritima1-deoxy-D-xylulose 5-phosphate reductoisomerase1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]Metabolic pathways 3.40.50.720 141 9 70 3.12 4.42
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Displaying entries 1 to 25 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2cvzA01
EKVAFIGLGAGYPAGHLARRFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLREG
TYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVLGGPEEAVERVRPFLAYAKKVVHVGP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2cvzA01
XEKVAFIGLGAXGYPXAGHLARRFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL
REGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVXLGGPEEAVERVRPFLAYAKKVVHVGP
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 21:24

Assigning to "3.40.50.720" based on similarity with "1j3vA01" (NWSI: 97.4522292993631, NWO: 100, SPS: 99.39, SPO: 100, RMSD: 0.14)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2cvzA01"

Flow stage update by auto on 28 Apr 2006 17:48

All required files are present for Domain "2cvzA01"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2cvzA01"

Insertion by auto on 10 Mar 2006 13:58

Final ChopClose added based on similarity with "1j3vA" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 99.09, SI: 97.9238754325259, SO: 100]