CATH Domain: 2ccwA00 XML data for domain: 2ccwA00

Molscript image for 2ccwA00
2ccwA00
PDB coordinates for domain 2ccwA00

PDB 2ccw, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.420 Cupredoxins - blue copper proteins Gene3D
2.60.40.420.5
2.60.40.420.5.1
2.60.40.420.5.1.1
2.60.40.420.5.1.1.1
2.60.40.420.5.1.1.1.1

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Segment boundaries for domain 2ccwA00

Chopping figure for domain 2ccwA00
DomainStart PDB ResidueStop PDB Residue
2ccwA00 1 129

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 2.60.40.420.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1qhqA00 87.72 Copper ion bindingPlasma membraneChloroflexus aurantiacus J-10-flAuracyanin-BPhotosynthetic electron transport chain 2.60.40.420 139 25 87 2.35 2.68
1fwxA02 81.33 Paracoccus denitrificansNitrous-oxide reductase 2.60.40.420 121 14 72 2.33 3.20
1sddB02 79.08 Coagulation factor VBos taurusCoagulation factor V (labile factor)Complement and coagulation cascades 2.60.40.420 125 6 72 2.83 3.93
1kbvA01 78.54 Neisseria gonorrhoeaeCopper-containing nitrite reductase 2.60.40.420 144 12 69 3.18 4.58
1ibyA00 78.42 Chain A, Red Copper Protein NitrosocyaninNitrosomonas europaea 2.60.40.420 112 13 70 2.54 3.60
3cvbA00 76.86 PlastocyaninPhormidium laminosum 2.60.40.420 102 20 72 3.22 4.42
1sddB01 75.37 Coagulation factor VBos taurusCoagulation factor V (labile factor)Complement and coagulation cascades 2.60.40.420 156 6 59 2.71 4.55
1kbvA02 75.06 Neisseria gonorrhoeaeCopper-containing nitrite reductase 2.60.40.420 154 10 60 2.76 4.57
1kv7A02 75.03 Blue copper oxidase cueOResponse to copper ionCopper ion bindingPeriplasmic spaceOxidoreductase activity, oxidizing metal ions 2.60.40.420 152 6 60 2.64 4.36
1v54B02 74.96 Cardiac muscle contractionParkinson's diseaseOxidative phosphorylationCytochrome c oxidase subunit 2Alzheimer's disease 2.60.40.420 136 8 66 2.99 4.52
1cyxA00 73.82 Oxidative phosphorylationMetabolic pathwaysIntegral to plasma membraneOxidoreduction-driven active transmembrane transporter activityEscherichia coli K-12 2.60.40.420 158 7 56 2.58 4.53
2gsmB02 73.58 Rhodobacter sphaeroidesOxidative phosphorylationCytochrome c oxidase subunit 2Cytochrome c oxidase subunit II [EC:1.9.3.1]Metabolic pathways 2.60.40.420 153 10 58 2.82 4.79
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2ccwA00
AQCEATVESNDAMQYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRV
IAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLGS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ccwA00
AQCEATVESNDAMQYNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRV
IAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLGS
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 22:06

Assigning to "2.60.40.420" based on similarity with "1arn000" (NWSI: 100, NWO: 100, SPS: 97.78, SPO: 100, RMSD: 0.75)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2ccwA00"

Flow stage update by auto on 28 Apr 2006 17:49

All required files are present for Domain "2ccwA00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2ccwA00"

Insertion by auto on 17 Mar 2006 21:00

Final ChopClose added based on similarity with "1arn0" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 97.78, SI: 100, SO: 100]