CATH Domain: 2c4jA01 XML data for domain: 2c4jA01

Molscript image for 2c4jA01
2c4jA01
PDB coordinates for domain 2c4jA01

PDB 2c4j, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.30 Glutaredoxin
3.40.30.10 Glutaredoxin Gene3D
3.40.30.10.9
3.40.30.10.9.1
3.40.30.10.9.1.1
3.40.30.10.9.1.1.1
3.40.30.10.9.1.1.1.1

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Segment boundaries for domain 2c4jA01

Chopping figure for domain 2c4jA01
DomainStart PDB ResidueStop PDB Residue
2c4jA01 2 86
2c4jA01 192 218
2c4jA02 87 191

Structural Neighbourhood (18 entries)

There are 18 matching structural neighberhood comparisons for CATH ID 3.40.30.10.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 18 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1b4pA01 96.45 Rattus norvegicusPlasma membraneSoluble fractionGlutathione S-transferase Mu 2Glutathione transferase activity 3.40.30.10 112 81 100 0.56 0.56
1tu7A01 88.23 Onchocerca volvulusGlutathione S-transferase 2 3.40.30.10 99 35 87 2.36 2.70
2a2rA01 88.11 Anti-apoptosisPathways in cancerCentral nervous system developmentGlutathione S-transferase PGlutathione metabolism 3.40.30.10 101 28 86 2.02 2.33
1vf1A01 86.28 Glutathione S-transferase [EC:2.5.1.18]Drug metabolism - cytochrome P450Metabolism of xenobiotics by cytochrome P450Glutathione S-transferase 3Gallus gallus 3.40.30.10 117 26 89 3.08 3.43
2gsqA01 85.99 Ommastrephes sloaniGlutathione S-transferase 3.40.30.10 94 28 80 1.66 2.07
2cvdA01 85.26 Prostaglandin-D synthase activityArachidonic acid metabolismProstaglandin-H2 D-isomerase [EC:5.3.99.2]Metabolic pathwaysCytoplasm 3.40.30.10 90 27 79 2.63 3.31
1oktA01 84.50 Glutathione S-transferase [EC:2.5.1.18]Metabolism of xenobiotics by cytochrome P450Glutathione S-transferaseGlutathione metabolismPlasmodium falciparum 3.40.30.10 85 29 73 2.31 3.16
2c3nA01 82.34 Soluble fractionGlutathione S-transferase theta-1Glutathione metabolic processGlutathione transferase activityGlutathione metabolism 3.40.30.10 79 21 69 2.24 3.22
2pvqA01 82.29 Glutathione S-transferaseOchrobactrum anthropi 3.40.30.10 95 18 79 3.31 4.17
2wb9A01 81.78 Fasciola hepaticaGlutathione transferase sigma class 3.40.30.10 82 30 66 1.69 2.56
3ergA01 81.77 Glutathione S-transferase 2Glutathione metabolic processSaccharomyces cerevisiaeGlutathione transferase activityMitochondrion 3.40.30.10 90 14 75 3.37 4.49
3f6fA01 81.43 Glutathione S-transferase [EC:2.5.1.18]Drug metabolism - cytochrome P450Metabolism of xenobiotics by cytochrome P450Glutathione S transferase D10Glutathione transferase activity 3.40.30.10 78 15 68 2.30 3.35
2cz2A01 80.60 Tyrosine metabolismGlutathione transferase activityGlutathione metabolismMetabolic pathwaysGlutathione S-transferase [EC:2.5.1.18] 3.40.30.10 76 22 66 2.25 3.36
3cbuA01 79.89 Glutathione S-transferase [EC:2.5.1.18]Ralstonia eutropha JMP134Metabolism of xenobiotics by cytochrome P450Probable gst-related proteinGlutathione metabolism 3.40.30.10 75 16 64 3.04 4.73
1abaA00 78.87 Enterobacteria phage T4Glutaredoxin 3.40.30.10 87 8 68 2.58 3.75
3lgcA00 78.17 Francisella tularensis subsp. tularensisGlutaredoxin 1Glutaredoxin 1 3.40.30.10 86 9 70 3.17 4.49
1egoA00 77.42 Glutaredoxin 1Glutaredoxin-1Protein bindingEscherichia coli K-12 3.40.30.10 85 5 69 3.34 4.80
1nm3A02 76.90 Peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]Haemophilus influenzaeHybrid peroxiredoxin hyPrx5 3.40.30.10 70 14 61 2.65 4.30
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Displaying entries 1 to 18 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2c4jA01
PMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNAILRYIA
RKHNLEKISAYMKSSRFLPRPVFSKMAVWGNK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2c4jA01
MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNAILRYI
ARKHNLEKISAYMKSSRFLPRPVFSKMAVWGNK
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 21:54

Assigning to "3.40.30.10" based on similarity with "2c4jC01" (NWSI: 100, NWO: 100, SPS: 98.09, SPO: 100, RMSD: 0.44)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2c4jA01"

Flow stage update by auto on 28 Apr 2006 17:49

All required files are present for Domain "2c4jA01"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2c4jA01"

Insertion by auto on 10 Mar 2006 20:13

Final ChopClose added based on similarity with "2c4jC" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 98.06, SI: 100, SO: 100]