CATH Domain: 2bw4A01 XML data for domain: 2bw4A01

Molscript image for 2bw4A01
2bw4A01
PDB coordinates for domain 2bw4A01

PDB 2bw4, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.420 Cupredoxins - blue copper proteins Gene3D
2.60.40.420.1
2.60.40.420.1.1
2.60.40.420.1.1.1
2.60.40.420.1.1.1.1
2.60.40.420.1.1.1.1.1

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Segment boundaries for domain 2bw4A01

Chopping figure for domain 2bw4A01
DomainStart PDB ResidueStop PDB Residue
2bw4A01 7 158
2bw4A02 159 325

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.60.40.420.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1kbvA01 91.78 Neisseria gonorrhoeaeCopper-containing nitrite reductase 2.60.40.420 144 40 94 1.10 1.16
1aozA01 84.10 L-ascorbate oxidaseCucurbita pepo var. melopepo 2.60.40.420 130 23 76 2.04 2.67
1sddB01 83.16 Coagulation factor VBos taurusCoagulation factor V (labile factor)Complement and coagulation cascades 2.60.40.420 156 13 72 1.77 2.44
2qt6A01 82.93 LaccaseLentinus tigrinus 2.60.40.420 132 20 76 3.10 4.03
1kbvA02 81.52 Neisseria gonorrhoeaeCopper-containing nitrite reductase 2.60.40.420 154 12 75 2.61 3.46
1ibyA00 81.33 Chain A, Red Copper Protein NitrosocyaninNitrosomonas europaea 2.60.40.420 112 17 68 2.55 3.73
1gskA03 80.97 Spore coat protein ABacillus subtilisSpore coat protein A 2.60.40.420 154 11 72 2.18 3.02
1qhqA00 80.31 Copper ion bindingPlasma membraneChloroflexus aurantiacus J-10-flAuracyanin-BPhotosynthetic electron transport chain 2.60.40.420 139 17 69 3.48 4.99
2ccwA00 77.83 Azurin-2Achromobacter xylosoxidans 2.60.40.420 129 13 65 3.26 4.96
1aozA03 75.01 L-ascorbate oxidaseCucurbita pepo var. melopepo 2.60.40.420 216 12 52 2.48 4.74
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2bw4A01
VDISTLPRVKVDLVKPPFVHAHDQVAKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLI
NPDTNTLLHNIDFHAATGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2bw4A01
AAGAAPVDISTLPRVKVDLVKPPFVHAHDQVAKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDY
VELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLP
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 21:30

Assigning to "2.60.40.420" based on similarity with "1niaA01" (NWSI: 100, NWO: 100, SPS: 97.47, SPO: 99, RMSD: 0.36)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2bw4A01"

Flow stage update by auto on 28 Apr 2006 17:48

All required files are present for Domain "2bw4A01"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2bw4A01"

Insertion by auto on 10 Mar 2006 16:16

Final ChopClose added based on similarity with "1niaA" [LEE: 1, LME: 0, MR: 0, LG: 1, SS: 96.08, SI: 100, SO: 100]