CATH Domain: 2bvrH01 XML data for domain: 2bvrH01

Molscript image for 2bvrH01
2bvrH01
PDB coordinates for domain 2bvrH01

PDB 2bvr, Chain H, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.10 Thrombin, subunit H
2.40.10.10 Trypsin-like serine proteases Gene3D
2.40.10.10.38
2.40.10.10.38.1
2.40.10.10.38.1.1
2.40.10.10.38.1.1.1
2.40.10.10.38.1.1.1.1

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Segment boundaries for domain 2bvrH01

Chopping figure for domain 2bvrH01
DomainStart PDB ResidueStop PDB Residue
2bvrH01 16 27
2bvrH01 121 232
2bvrH02 28 120
2bvrH02 233 243

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 2.40.10.10.38.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1q3xA02 91.51 Serine-type endopeptidase activityHomo sapiensMannan-binding lectin serine protease 2Calcium-dependent protein bindingComplement activation, lectin pathway 2.40.10.10 137 36 93 1.60 1.71
2o8tA01 90.65 Regulation of smooth muscle cell migrationCell surfaceUrokinase-type plasminogen activatorSignal transductionProteolysis 2.40.10.10 128 31 93 1.75 1.86
1k2i101 90.03 Bos taurusChymotrypsinogen A 2.40.10.10 118 38 89 1.68 1.88
1elvA02 89.80 Serine-type endopeptidase activitySystemic lupus erythematosusComplement C1s subcomponentHomo sapiensComplement component 1, s subcomponent [EC:3.4.21.42] 2.40.10.10 126 38 92 1.88 2.03
3gylB01 89.64 ProstasinPlasma membraneProtease, serine, 8 (prostasin) [EC:3.4.21.-]Homo sapiensExtracellular space 2.40.10.10 133 34 92 1.70 1.84
1eq9A01 89.47 Chymotrypsin-1Solenopsis invicta 2.40.10.10 117 33 87 1.46 1.66
2hlcA02 88.42 CollagenaseHypoderma lineatum 2.40.10.10 126 26 90 1.93 2.12
2asuB01 88.10 Hepatocyte growth factor-like proteinHomo sapiens 2.40.10.10 122 30 91 2.54 2.77
1si5H01 87.30 Pathways in cancerHepatocyte growth factorEpithelial to mesenchymal transitionRenal cell carcinomaCytokine-cytokine receptor interaction 2.40.10.10 119 26 89 2.21 2.47
1yphE00 82.98 Bos taurusChymotrypsinogen A 2.40.10.10 97 32 63 1.80 2.83
1dleB02 81.27 Complement factor BComplement bindingHomo sapiensComponent factor B [EC:3.4.21.47]Complement and coagulation cascades 2.40.10.10 142 19 75 2.09 2.77
1y8tB02 79.52 Two-component systemPutative serine protease PepD [EC:3.4.21.-]PROBABLE SERINE PROTEASE PEPD (SERINE PROTEINASE) (MTB32B)Mycobacterium tuberculosis 2.40.10.10 111 16 68 3.36 4.87
2qf3B02 78.67 Protease degSProtein bindingSerine protease DegS [EC:3.4.21.-]Escherichia coli K-12 2.40.10.10 103 13 68 3.20 4.64
1svpA02 71.65 Sindbis virusStructural polyprotein 2.40.10.10 86 11 53 2.56 4.83
3fanA02 69.14 Porcine reproductive and respiratory syndrome virusNon-structural protein 2.40.10.10 69 15 47 2.37 4.97
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Displaying entries 1 to 15 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2bvrH01
IVEGSDAEIGMSVCLPDRETAASLLQAGYKGRVTGWGNLKEKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKP
DEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2bvrH01
IVEGSDAEIGMSVCLPDRETAASLLQAGYKGRVTGWGNLKEKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKP
DEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVF
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 08 Aug 2007 14:28

Assigning to "2.40.10.10" based on similarity with "1h8dH01"

Flow stage update by auto on 08 Aug 2007 14:25

No in_process hits for Domain "2bvrH01" ready to be processed

Flow stage update by auto on 08 Aug 2007 14:25

NW result present for Domain "2bvrH01"

Flow stage update by auto on 21 Jul 2007 23:04

All required files are present for Domain "2bvrH01"

Flow stage update by auto on 20 Jul 2007 19:34

Beginning processing for Domain "2bvrH01"

Insertion by auto on 20 Jul 2007 18:06

Final ChopClose added based on similarity with "1hxeH"