CATH Domain: 2bogX00 XML data for domain: 2bogX00

Molscript image for 2bogX00
2bogX00
PDB coordinates for domain 2bogX00

PDB 2bog, Chain X, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.40 7-stranded glycosidases (cellulases) Gene3D
3.20.20.40.3
3.20.20.40.3.1
3.20.20.40.3.1.1
3.20.20.40.3.1.1.1
3.20.20.40.3.1.1.1.1

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Segment boundaries for domain 2bogX00

Chopping figure for domain 2bogX00
DomainStart PDB ResidueStop PDB Residue
2bogX00 1 286

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|2bogX00
NDSPFYVNPNMSSAEWVRNNPNDPRTPVIRDRIASVPQGTWFAHHNPGQITGQVDALMSAAQAAGKIPILVVSNAPGRDC
GAPSHSAYRSWIDEFAAGLKNRPAYIIVEPDLISLMSSCMQHVQQEVLETMAYAGKALKAGSSQARIYFDAGHSAWHSPA
QMASWLQQADISNSAHGIATNTSNYRWTADEVAYAKAVLSAIGNPSLRAVIDTSRNGNGPAGNEWCDPSGRAIGTPSTTN
TGDPMIDAFLWIKLPGEADGCIAGAGQFVPQAAYEMAIAA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2bogX00
NDSPFYVNPNMSSAEWVRNNPNDPRTPVIRDRIASVPQGTWFAHHNPGQITGQVDALMSAAQAAGKIPILVVSNAPGRDC
GNHSSGGAPSHSAYRSWIDEFAAGLKNRPAYIIVEPDLISLMSSCMQHVQQEVLETMAYAGKALKAGSSQARIYFDAGHS
AWHSPAQMASWLQQADISNSAHGIATNTSNYRWTADEVAYAKAVLSAIGNPSLRAVIDTSRNGNGPAGNEWCDPSGRAIG
TPSTTNTGDPMIDAFLWIKLPGEADGCIAGAGQFVPQAAYEMAIAA
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 21:11

Assigning to "3.20.20.40" based on similarity with "1tml000" (NWSI: 99.6503496503497, NWO: 100, SPS: 96.91, SPO: 97, RMSD: 0.57)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2bogX00"

Flow stage update by auto on 28 Apr 2006 17:48

All required files are present for Domain "2bogX00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2bogX00"

Insertion by auto on 10 Mar 2006 07:34

Final ChopClose added based on similarity with "1tml0" [LEE: 0, LME: 0, MR: 0, LG: 6, SS: 96.91, SI: 99.6503496503497, SO: 100]