CATH Domain: 2bmwA01 XML data for domain: 2bmwA01

Molscript image for 2bmwA01
2bmwA01
PDB coordinates for domain 2bmwA01

PDB 2bmw, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.30 Elongation Factor Tu (Ef-tu); domain 3
2.40.30.10 Translation factors Gene3D
2.40.30.10.8
2.40.30.10.8.1
2.40.30.10.8.1.1
2.40.30.10.8.1.1.1
2.40.30.10.8.1.1.1.1

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Segment boundaries for domain 2bmwA01

Chopping figure for domain 2bmwA01
DomainStart PDB ResidueStop PDB Residue
2bmwA01 9 136
2bmwA02 137 303

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 2.40.30.10.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2rc5B01 88.93 Leptospira interrogansFerredoxin--NADP reductase 2.40.30.10 140 32 89 2.84 3.18
1ja1A02 87.46 Rattus norvegicusNitric oxide catabolic processMicrosomeCellular response to peptide hormone stimulusNADPH-ferrihemoprotein reductase [EC:1.6.2.4] 2.40.30.10 122 22 88 3.96 4.49
1ddgA01 87.01 Sulfur metabolismMetabolic pathwaysSulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]Sulfite reductase [NADPH] flavoprotein alpha-componentProtein binding 2.40.30.10 114 25 85 2.74 3.19
2piaA01 83.95 Burkholderia cepaciaPhthalate dioxygenase reductase 2.40.30.10 104 12 77 3.23 4.18
1ep3B01 82.53 Lactococcus lactis subsp. cremoris MG1363Dihydroorotate dehydrogenase electron transfer subunitProtein bindingDihydroorotate dehydrogenase electron transfer subunit 2.40.30.10 99 20 75 2.79 3.68
2qdxA01 82.28 Pseudomonas aeruginosaFerredoxin--NADP+ reductase [EC:1.18.1.2]Ferredoxin--NADP+ reductase 2.40.30.10 95 18 73 1.86 2.53
2gpjA01 82.19 Siderophore-interacting proteinShewanella putrefaciens CN-32 2.40.30.10 98 21 73 2.25 3.06
1qfjA01 81.91 Porphyrin and chlorophyll metabolismAquacobalamin reductase / NAD(P)H-flavin reductase [EC:1.16.1.3 1.5.1.29]NAD(P)H-flavin reductaseEscherichia coli K-12 2.40.30.10 91 17 66 2.05 3.09
1kzlA02 79.48 NucleusCytosolSchizosaccharomyces pombeMetabolic pathwaysRiboflavin metabolism 2.40.30.20 101 8 64 2.24 3.45
1i8dA01 79.15 Riboflavin metabolismMetabolic pathwaysRiboflavin synthase activityRiboflavin synthase alpha chain [EC:2.5.1.9]Riboflavin synthase alpha chain 2.40.30.20 89 11 67 2.98 4.44
1i8dC02 76.09 Riboflavin metabolismMetabolic pathwaysRiboflavin synthase activityRiboflavin synthase alpha chain [EC:2.5.1.9]Riboflavin synthase alpha chain 2.40.30.20 88 13 57 2.37 4.16
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2bmwA01
DVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGD
DVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2bmwA01
MTQAKAKHADVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLY
SIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPV
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 01 Nov 2006 14:53

Assigning to "2.40.30.10" based on similarity with "1b2rA01"

Flow stage update by auto on 18 Oct 2006 21:27

No in_process hits for Domain "2bmwA01" ready to be processed

Flow stage update by auto on 18 Oct 2006 21:27

NW result present for Domain "2bmwA01"

Flow stage update by auto on 16 Oct 2006 16:34

All required files are present for Domain "2bmwA01"

Flow stage update by auto on 16 Oct 2006 03:13

Beginning processing for Domain "2bmwA01"

Insertion by auto on 15 Oct 2006 22:31

Final ChopClose added based on similarity with "1h42A"