CATH Domain: 2bjwA02 XML data for domain: 2bjwA02

Molscript image for 2bjwA02
2bjwA02
PDB coordinates for domain 2bjwA02

PDB 2bjw, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.8 Helicase, Ruva Protein; domain 3
1.10.8.60 Gene3D
1.10.8.60.2
1.10.8.60.2.1
1.10.8.60.2.1.1
1.10.8.60.2.1.1.1
1.10.8.60.2.1.1.1.1

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Segment boundaries for domain 2bjwA02

Chopping figure for domain 2bjwA02
DomainStart PDB ResidueStop PDB Residue
2bjwA01 9 179
2bjwA02 180 259

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 1.10.8.60.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ny5B03 91.10 Transcriptional regulator (NtrC family)Two-component system, NtrC family, response regulatorAquifex aeolicus 1.10.8.60 74 37 88 1.50 1.69
1in4A03 82.19 Holliday junction DNA helicase RuvBThermotoga maritimaHomologous recombinationHolliday junction ATP-dependent DNA helicase ruvB 1.10.8.60 75 9 83 3.78 4.52
2z4sA02 82.08 Thermotoga maritimaTwo-component systemChromosomal replication initiator proteinChromosomal replication initiator protein dnaA 1.10.8.60 72 12 86 3.94 4.58
1qzmA00 79.54 Serine-type endopeptidase activityATP-dependent Lon protease [EC:3.4.21.53]ATP-dependent protease LaResponse to heatProteolysis 1.10.8.60 94 10 81 3.42 4.18
1njgA02 79.17 Pyrimidine metabolismDNA replicationPurine metabolismMetabolic pathwaysHomologous recombination 1.10.8.60 66 9 81 3.81 4.70
1l8qA02 76.63 Two-component systemChromosomal replication initiator proteinChromosomal replication initiator protein dnaAAquifex aeolicus 1.10.8.60 49 16 59 2.35 3.95
1sxjC02 76.62 Nucleotide excision repairDNA replicationLeading strand elongationReplication factor C subunit 3Replication factor C subunit 3/5 1.10.8.60 69 15 86 4.12 4.79
1e32A04 75.46 Mus musculusPolyubiquitin bindingProtein complexAggresome assemblyTransitional endoplasmic reticulum ATPase 1.10.8.60 87 6 72 2.89 3.99
1sxjD02 74.67 DNA replicationNucleotide excision repairLeading strand elongationCell cycle checkpointProtein binding 1.10.8.60 70 7 83 4.01 4.80
1sxjE02 72.97 Leading strand elongationNucleotide excision repairDNA replicationReplication factor C subunit 3/5Sister chromatid cohesion 1.10.8.60 64 7 75 3.75 4.94
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2bjwA02
RERESDIMLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2bjwA02
RERESDIMLMAEYFAIQMCREIKLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRP
PEDAIA
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 20 Aug 2007 22:21

Assigning to "1.10.8.60" based on similarity with "1ojlA02"

Flow stage update by auto on 20 Aug 2007 22:13

No in_process hits for Domain "2bjwA02" ready to be processed

Flow stage update by auto on 20 Aug 2007 22:13

NW result present for Domain "2bjwA02"

Flow stage update by auto on 16 Aug 2007 17:16

All required files are present for Domain "2bjwA02"

Flow stage update by auto on 16 Aug 2007 00:02

Beginning processing for Domain "2bjwA02"

Insertion by auto on 15 Aug 2007 19:16

Final ChopClose added based on similarity with "1ojlB"