CATH Domain: 2bbkH00 XML data for domain: 2bbkH00

Molscript image for 2bbkH00
2bbkH00
PDB coordinates for domain 2bbkH00

PDB 2bbk, Chain H, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.130 7 Propellor
2.130.10 Methylamine Dehydrogenase; Chain H
2.130.10.10 YVTN repeat-like/Quinoprotein amine dehydrogenase Gene3D
2.130.10.10.3
2.130.10.10.3.1
2.130.10.10.3.1.1
2.130.10.10.3.1.1.1
2.130.10.10.3.1.1.1.1

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Segment boundaries for domain 2bbkH00

Chopping figure for domain 2bbkH00
DomainStart PDB ResidueStop PDB Residue
2bbkH00 19 373

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.130.10.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1mdaH00 91.91 2.130.10.10 368 30 95 0.80 0.84
1pbyB00 77.39 Paracoccus denitrificansQuinohemoprotein amine dehydrogenase 40 kDa subunit 2.130.10.10 337 15 83 3.31 3.97
1ri6A00 75.98 Pentose phosphate pathwayMetabolic pathways6-phosphogluconolactonase [EC:3.1.1.31]6-phosphogluconolactonase activity6-phosphogluconolactonase 2.130.10.10 333 12 86 4.07 4.71
1jmxB00 75.88 Pseudomonas putidaQuinohemoprotein amine dehydrogenase 40 kDa subunit 2.130.10.10 339 11 83 3.72 4.43
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2bbkH00
DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV
EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT
FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA
ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST
GDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2bbkH00
DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYV
EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT
FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEA
ERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST
GDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:48

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:11

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"