CATH Domain: 2bbaA00 XML data for domain: 2bbaA00

Molscript image for 2bbaA00
2bbaA00
PDB coordinates for domain 2bbaA00

PDB 2bba, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.260 Galactose-binding domain-like Gene3D
2.60.120.260.5
2.60.120.260.5.1
2.60.120.260.5.1.1
2.60.120.260.5.1.1.1
2.60.120.260.5.1.1.1.1

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Segment boundaries for domain 2bbaA00

Chopping figure for domain 2bbaA00
DomainStart PDB ResidueStop PDB Residue
2bbaA00 12 196

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.60.120.260.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1uxzA00 76.46 Cellvibrio mixtusCellulase B 2.60.120.260 131 9 70 3.30 4.71
3jxsA00 76.12 Rhodothermus marinusXylanase 2.60.120.260 166 7 76 3.50 4.57
1gnyA00 76.04 Cellvibrio japonicusEndo-beta-1,4-xylanase 2.60.120.260 153 3 74 3.31 4.45
1umhA00 75.15 Glycoprotein catabolic processRegulation of protein ubiquitinationUbiquitin mediated proteolysisDendritic spineCytosol 2.60.120.260 184 5 79 3.98 4.98
1gwmA00 74.75 Piromyces equiNon-catalytic protein 1 2.60.120.360 153 7 70 3.51 4.97
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2bbaA00
HHHHHEETLLNTKLETADLKWVTFPQVDGQWEELSGLDEEQHSVRTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLR
FTMLECLSLPRAGRSCKETFTVFYYESDADTATALTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVNVKTLRLGPLSK
AGFYLAFQDQGACMALLSLHLFYKK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2bbaA00
HHHHHEETLLNTKLETADLKWVTFPQVDGQWEELSGLDEEQHSVRTYEVCDVQRAPGQAHWLRTGWVPRRGAVHVYATLR
FTMLECLSLPRAGRSCKETFTVFYYESDADTATALTPAWMENPYIKVDTVAAEHLTRKRPGAEATGKVNVKTLRLGPLSK
AGFYLAFQDQGACMALLSLHLFYKK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Nov 2006 18:35

Assigning to "2.60.120.260" based on similarity with "1kgyA00"

Flow stage update by auto on 28 Nov 2006 18:22

No in_process hits for Domain "2bbaA00" ready to be processed

Flow stage update by auto on 28 Nov 2006 18:22

NW result present for Domain "2bbaA00"

Flow stage update by auto on 28 Nov 2006 18:22

All required files are present for Domain "2bbaA00"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "2bbaA00"

Insertion by cuff on 20 Nov 2006 14:42

good batch of choppings