CATH Domain: 2b8pA00 XML data for domain: 2b8pA00

Molscript image for 2b8pA00
2b8pA00
PDB coordinates for domain 2b8pA00

PDB 2b8p, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.141 Gene3D
3.30.70.141.2
3.30.70.141.2.1
3.30.70.141.2.1.1
3.30.70.141.2.1.1.1
3.30.70.141.2.1.1.1.8

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Segment boundaries for domain 2b8pA00

Chopping figure for domain 2b8pA00
DomainStart PDB ResidueStop PDB Residue
2b8pA00 -4 129

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.30.70.141.2.1.1.1.8 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1f0xA01 74.71 Pyruvate metabolismD-lactate dehydrogenaseNAD or NADH bindingEscherichia coli K-12D-lactate dehydrogenase [EC:1.1.1.28] 3.30.70.610 100 9 68 3.11 4.51
1zpvB00 73.70 ACT domain-containing proteinUPF0237 protein SP_0238Streptococcus pneumoniae 3.30.70.260 81 11 59 2.98 4.98
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2b8pA00
YKKAGLQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKEYFNDNCDFMVSGPIISIVYEGTD
AISKIRRLQGNILTPGTIRGDLANDIRENLIHASDSEDSAVDEISIWFP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2b8pA00
SYYHHHHHHLESTSLYKKAGLQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSMKFWSKAPRNLIEQHYKEHSEQSYFN
DNCDFMVSGPIISIVYEGTDAISKIRRLQGNILTPGTIRGDLANDIRENLIHASDSEDSAVDEISIWFPETKMETDN
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Nov 2006 18:35

Assigning to "3.30.70.141" based on similarity with "1k44A00"

Flow stage update by auto on 28 Nov 2006 18:22

No in_process hits for Domain "2b8pA00" ready to be processed

Flow stage update by auto on 28 Nov 2006 18:22

NW result present for Domain "2b8pA00"

Flow stage update by auto on 28 Nov 2006 18:22

All required files are present for Domain "2b8pA00"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "2b8pA00"

Insertion by cuff on 21 Nov 2006 17:20

nice batch of choppings