CATH Domain: 2b5tI01 XML data for domain: 2b5tI01

Molscript image for 2b5tI01
2b5tI01
PDB coordinates for domain 2b5tI01

PDB 2b5t, Chain I, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.497 Antithrombin; Chain I, domain 2
3.30.497.10 Antithrombin, subunit I, domain 2 Gene3D
3.30.497.10.10
3.30.497.10.10.1
3.30.497.10.10.1.1
3.30.497.10.10.1.1.1
3.30.497.10.10.1.1.1.1

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Segment boundaries for domain 2b5tI01

Chopping figure for domain 2b5tI01
DomainStart PDB ResidueStop PDB Residue
2b5tI01 12 224
2b5tI01 321 377
2b5tI02 225 320
2b5tI02 380 429

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.30.497.10.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1imvA02 83.24 Negative regulation of angiogenesisHomo sapiensPigment epithelium-derived factorPositive regulation of neurogenesisCell proliferation 3.30.497.10 206 24 79 2.03 2.55
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2b5tI01
PRDIPMNPMCIYRSPEKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQL
MEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQS
RAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEG
RDDLYVSDAFHKAFLEVNE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2b5tI01
PRDIPMNPMCIYRSPEKKATEDEGSEQKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTK
LGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKASKLVSANRLFGDKSLTFNETYQDISELVYGAKLQ
PLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLPRFRIEDGFSLKEQLQDMGLVDLFSPE
KSKLPGIVAEGRDDLYVSDAFHKAFLEVNE
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 01 Nov 2006 15:05

Assigning to "3.30.497.10" based on similarity with "1athB02"

Flow stage update by auto on 18 Oct 2006 17:37

No in_process hits for Domain "2b5tI01" ready to be processed

Flow stage update by auto on 18 Oct 2006 17:37

NW result present for Domain "2b5tI01"

Flow stage update by auto on 16 Oct 2006 16:34

All required files are present for Domain "2b5tI01"

Flow stage update by auto on 16 Oct 2006 03:13

Beginning processing for Domain "2b5tI01"

Insertion by auto on 15 Oct 2006 23:21

Final ChopClose added based on similarity with "1t1fA"