CATH Domain: 2ayhA00 XML data for domain: 2ayhA00

Molscript image for 2ayhA00
2ayhA00
PDB coordinates for domain 2ayhA00

PDB 2ayh, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.200 Gene3D
2.60.120.200.6
2.60.120.200.6.1
2.60.120.200.6.1.1
2.60.120.200.6.1.1.1
2.60.120.200.6.1.1.1.1

[top]
Segment boundaries for domain 2ayhA00

Chopping figure for domain 2ayhA00
DomainStart PDB ResidueStop PDB Residue
2ayhA00 1 214

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.60.120.200.6.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ajoB00 86.83 Paenibacillus maceransBeta-glucanase 2.60.120.200 213 58 58 1.45 2.46
1ajkA00 86.32 Paenibacillus maceransBeta-glucanase 2.60.120.200 212 56 58 1.75 3.00
3h0oA00 83.16 Fibrobacter succinogenes subsp. succinogenes S85Beta-glucanase 2.60.120.200 240 24 65 1.99 3.02
1dypA00 82.84 Kappa-carrageenasePseudoalteromonas carrageenovora 2.60.120.200 266 19 74 2.96 3.96
1o4yA00 82.57 Zobellia galactanivoransBeta-agarase A 2.60.120.200 270 17 75 2.79 3.69
1umzB00 81.53 Xyloglucan endotransglycosylasePopulus tremula x Populus tremuloides 2.60.120.200 264 23 69 2.26 3.26
1w0pA01 77.57 Vibrio choleraeSialidase 2.60.120.200 177 13 75 3.45 4.56
2vu9A01 76.22 Botulinum neurotoxin type AClostridium botulinum 2.60.120.200 227 7 74 3.66 4.89
2ac1A02 75.33 Galactose metabolismCell wallBeta-fructofuranosidase [EC:3.2.1.26]Metabolic pathwaysBeta-fructofuranosidase activity 2.60.120.560 192 3 68 3.42 4.98
1ux6A02 75.31 ECM-receptor interactionPositive regulation of tumor necrosis factor biosynthetic processPositive regulation of angiogenesisProteoglycan bindingNegative regulation of caspase activity 2.60.120.200 208 5 77 3.85 4.99
[1]
Displaying entries 1 to 10 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2ayhA00
QTGGSFFEPFNSYNSGTWEKADGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMK
PAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYV
DGVLKHTATANIPSTPGKIMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSN
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2ayhA00
QTGGSFFEPFNSYNSGTWEKADGYSNGGVFNCTWRANNVNFTNDGKLKLGLTSSAYNKFDCAEYRSTNIYGYGLYEVSMK
PAKNTGIVSSFFTYTGPAHGTQWDEIDIEFLGKDTTKVQFNYYTNGVGGHEKVISLGFDASKGFHTYAFDWQPGYIKWYV
DGVLKHTATANIPSTPGKIMMNLWNGTGVDDWLGSYNGANPLYAEYDWVKYTSN
BLAST against CATH

[top]
Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "2ayh000" to "2ayhA00" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:45

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:06

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"