CATH Domain: 2asuB02 XML data for domain: 2asuB02

Molscript image for 2asuB02
2asuB02
PDB coordinates for domain 2asuB02

PDB 2asu, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.10 Thrombin, subunit H
2.40.10.10 Trypsin-like serine proteases Gene3D
2.40.10.10.62
2.40.10.10.62.1
2.40.10.10.62.1.1
2.40.10.10.62.1.1.1
2.40.10.10.62.1.1.1.1

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Segment boundaries for domain 2asuB02

Chopping figure for domain 2asuB02
DomainStart PDB ResidueStop PDB Residue
2asuB01 484 492
2asuB01 587 699
2asuB02 493 586
2asuB02 700 708

Structural Neighbourhood (14 entries)

There are 14 matching structural neighberhood comparisons for CATH ID 2.40.10.10.62.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 14 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1orfA02 90.57 Serine-type endopeptidase activityGranzyme A [EC:3.4.21.78]Protein homodimerization activityNucleusCleavage of lamin 2.40.10.10 105 27 90 1.93 2.13
3govB02 88.40 Serine-type endopeptidase activityCalcium ion bindingProtein homodimerization activityExtracellular spaceProtein binding 2.40.10.10 123 30 82 1.59 1.94
2r0lA02 88.31 Serine-type endopeptidase activityHomo sapiensHepatocyte growth factor activatorProtein bindingProteolysis 2.40.10.10 113 31 86 1.75 2.02
1q3xA03 88.17 Serine-type endopeptidase activityHomo sapiensMannan-binding lectin serine protease 2Calcium-dependent protein bindingComplement activation, lectin pathway 2.40.10.10 100 17 90 2.15 2.38
1fiwA02 87.35 Ovis ariesAcrosinDrug binding 2.40.10.10 120 30 85 2.03 2.39
1ky9A01 82.26 Two-component systemSerine-type endopeptidase activityProtease doResponse to temperature stimulusProtein binding 2.40.10.10 88 11 75 2.54 3.35
2pkaA00 81.10 Sus scrofaGlandular kallikrein 2.40.10.10 80 28 66 2.80 4.24
2qf3A01 80.78 Protease degSProtein bindingSerine protease DegS [EC:3.4.21.-]Escherichia coli K-12 2.40.10.10 102 12 72 3.13 4.30
2h2zA02 80.51 Replicase polyprotein 1aSARS coronavirus 2.40.10.10 85 11 69 3.36 4.81
2z9iC01 80.05 Two-component systemPutative serine protease PepD [EC:3.4.21.-]PROBABLE SERINE PROTEASE PEPD (SERINE PROTEINASE) (MTB32B)Mycobacterium tuberculosis 2.40.10.10 91 14 72 2.59 3.56
1sotA01 79.11 Escherichia coli O157:H7Protease degSSerine protease DegS [EC:3.4.21.-] 2.40.10.10 118 15 70 2.90 4.12
2bhgA01 76.15 Foot-and-mouth disease virus (strain A10-61)Genome polyprotein 2.40.10.10 86 12 66 3.21 4.79
2hntC00 75.25 Serine-type endopeptidase activityFibrinolysisProthrombinSoluble fractionPositive regulation of protein phosphorylation 2.40.10.10 67 22 48 2.24 4.61
1eptA00 70.62 Sus scrofaTrypsin 2.40.10.10 43 34 30 1.21 4.02
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Displaying entries 1 to 14 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2asuB02
PWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLL
KLERSVTLNQRVALFVDWIHKVM
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2asuB02
PWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLL
KLERSVTLNQRVALFVDWIHKVMRLGHHHHHH
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 18 Dec 2006 07:33

Assigning to "2.40.10.10" based on similarity with "1bmlA02"

Flow stage update by auto on 18 Dec 2006 07:31

No in_process hits for Domain "2asuB02" ready to be processed

Flow stage update by auto on 18 Dec 2006 07:31

NW result present for Domain "2asuB02"

Flow stage update by auto on 15 Dec 2006 19:31

All required files are present for Domain "2asuB02"

Flow stage update by auto on 15 Dec 2006 15:36

Beginning processing for Domain "2asuB02"

Insertion by cuff on 15 Dec 2006 14:24

small selection of choppings