CATH Domain: 2asuB01 XML data for domain: 2asuB01

Molscript image for 2asuB01
2asuB01
PDB coordinates for domain 2asuB01

PDB 2asu, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.10 Thrombin, subunit H
2.40.10.10 Trypsin-like serine proteases Gene3D
2.40.10.10.59
2.40.10.10.59.1
2.40.10.10.59.1.1
2.40.10.10.59.1.1.1
2.40.10.10.59.1.1.1.1

[top]
Segment boundaries for domain 2asuB01

Chopping figure for domain 2asuB01
DomainStart PDB ResidueStop PDB Residue
2asuB01 484 492
2asuB01 587 699
2asuB02 493 586
2asuB02 700 708

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 2.40.10.10.59.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1si5H01 90.86 Pathways in cancerHepatocyte growth factorEpithelial to mesenchymal transitionRenal cell carcinomaCytokine-cytokine receptor interaction 2.40.10.10 119 40 95 1.93 2.01
1q3xA02 87.24 Serine-type endopeptidase activityHomo sapiensMannan-binding lectin serine protease 2Calcium-dependent protein bindingComplement activation, lectin pathway 2.40.10.10 137 22 89 2.43 2.73
2qf3B02 79.92 Protease degSProtein bindingSerine protease DegS [EC:3.4.21.-]Escherichia coli K-12 2.40.10.10 103 12 75 3.11 4.12
1dleB02 79.09 Complement factor BComplement bindingHomo sapiensComponent factor B [EC:3.4.21.47]Complement and coagulation cascades 2.40.10.10 142 18 71 3.23 4.50
1lcyA02 78.95 Serine-type endopeptidase activityHtrA serine peptidase 2 [EC:3.4.21.108]Endoplasmic reticulum membraneParkinson's diseaseNucleus 2.40.10.10 84 16 67 3.12 4.64
3fanA02 72.57 Porcine reproductive and respiratory syndrome virusNon-structural protein 2.40.10.10 69 13 52 2.33 4.44
1svpA02 72.44 Sindbis virusStructural polyprotein 2.40.10.10 86 9 58 2.56 4.40
[1]
Displaying entries 1 to 7 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2asuB01
VVGGHPGNSICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGAC
EGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSV
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2asuB01
VVGGHPGNSICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGAC
EGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSV
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 18 Dec 2006 07:33

Assigning to "2.40.10.10" based on similarity with "1bmlA01"

Flow stage update by auto on 18 Dec 2006 07:31

No in_process hits for Domain "2asuB01" ready to be processed

Flow stage update by auto on 18 Dec 2006 07:31

NW result present for Domain "2asuB01"

Flow stage update by auto on 15 Dec 2006 19:31

All required files are present for Domain "2asuB01"

Flow stage update by auto on 15 Dec 2006 15:36

Beginning processing for Domain "2asuB01"

Insertion by cuff on 15 Dec 2006 14:24

small selection of choppings