CATH Domain: 2arrA02 XML data for domain: 2arrA02

Molscript image for 2arrA02
2arrA02
PDB coordinates for domain 2arrA02

PDB 2arr, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.30 Roll
2.30.39 Alpha-1-antitrypsin; domain 1
2.30.39.10 Alpha-1-antitrypsin, domain 1 Gene3D
2.30.39.10.1
2.30.39.10.1.1
2.30.39.10.1.1.1
2.30.39.10.1.1.1.1
2.30.39.10.1.1.1.1.1

[top]
Segment boundaries for domain 2arrA02

Chopping figure for domain 2arrA02
DomainStart PDB ResidueStop PDB Residue
2arrA01 3 207
2arrA01 310 364
2arrA02 208 309
2arrA02 382 411

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.30.39.10.1.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2v95A02 89.43 Rattus norvegicusCorticosteroid-binding globulin 2.30.39.10 129 22 94 1.91 2.02
1jmoA02 88.26 Heparin cofactor IIHomo sapiensHeparin cofactor 2Complement and coagulation cascades 2.30.39.10 150 31 82 1.83 2.23
3b9fI02 88.23 Protein C inhibitorBos taurusComplement and coagulation cascadesPlasma serine protease inhibitor 2.30.39.10 139 24 85 1.83 2.14
2b5tI02 87.81 Antithrombin IIIProtease bindingHomo sapiensAntithrombin-IIIExtracellular space 2.30.39.10 146 30 83 2.25 2.69
2h4pA02 86.03 Gallus gallusHeterochromatin-associated protein MENT 2.30.39.10 102 36 75 2.76 3.67
1imvA01 85.21 Negative regulation of angiogenesisHomo sapiensPigment epithelium-derived factorCell proliferationPositive regulation of neurogenesis 2.30.39.10 169 24 73 2.29 3.12
1a7cA02 85.09 Plasminogen activator inhibitor-1Positive regulation of monocyte chemotaxisChagas diseaseCellular response to chemical stimulusNegative regulation of endopeptidase activity 2.30.39.10 120 21 78 3.87 4.94
1k9oI02 83.66 Manduca sextaAlaserpinProtein binding 2.30.39.10 161 24 75 3.50 4.66
1hp7A01 83.47 Alpha-1-antitrypsinProtease bindingAlpha-1-antitrypsinHomo sapiensExtracellular space 2.30.39.10 95 25 73 2.94 3.99
2rivA02 81.82 Thyroxine-binding globulinHomo sapiensExtracellular spaceSerine-type endopeptidase inhibitor activity 2.30.39.10 87 19 68 3.14 4.56
[1]
Displaying entries 1 to 10 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|2arrA02
WKTPFEKKLFPFRVNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDADVSTGLELLESEITYDKLN
KWTSKMAEDEVEVYIGHGGPQFVADHPFLFLIMHKITNCILFFGR
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|2arrA02
WKTPFEKKLNGLFPFRVNSAQRTPVQMMYLREKLNIGYIEDLKAQILELPYAGDVSMFLLLPDEIADVSTGLELLESEIT
YDKLNKWTSKDKMAEDEVEVYIGHGGPQFVADHPFLFLIMHKITNCILFFGR
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 30 Nov 2006 13:31

Assigning to "2.30.39.10" based on similarity with "1jrrA01"

Flow stage update by auto on 30 Nov 2006 13:27

No in_process hits for Domain "2arrA02" ready to be processed

Flow stage update by auto on 30 Nov 2006 13:27

NW result present for Domain "2arrA02"

Flow stage update by auto on 29 Nov 2006 13:24

All required files are present for Domain "2arrA02"

Flow stage update by auto on 28 Nov 2006 21:32

Beginning processing for Domain "2arrA02"

Insertion by auto on 28 Nov 2006 21:25

Final ChopClose added based on similarity with "2arqA"