CATH Domain: 2adrA01 XML data for domain: 2adrA01

Molscript image for 2adrA01
2adrA01
PDB coordinates for domain 2adrA01

PDB 2adr, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.160 Double Stranded RNA Binding Domain
3.30.160.60 Classic Zinc Finger Gene3D
3.30.160.60.23
3.30.160.60.23.1
3.30.160.60.23.1.1
3.30.160.60.23.1.1.1
3.30.160.60.23.1.1.1.1

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Segment boundaries for domain 2adrA01

Chopping figure for domain 2adrA01
DomainStart PDB ResidueStop PDB Residue
2adrA01 102 130
2adrA02 131 161

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.30.160.60.23.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1x5wA01 88.55 Homo sapiensZinc finger protein 64 homolog, isoforms 1 and 2 3.30.160.60 28 21 93 1.79 1.92
1pjqA02 81.95 Porphyrin and chlorophyll metabolismSalmonella enterica subsp. enterica serovar TyphimuriumSiroheme synthaseUroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]Metabolic pathways 3.30.160.110 35 3 74 1.46 1.97
3bidA01 77.26 Neisseria meningitidis serogroup BUPF0339 protein NMB1088 3.30.160.160 46 0 60 1.83 3.01
1ncsA00 76.68 Regulation of transcription involved in G1 phase of mitotic cell cycleNucleusProtein bindingTranscriptional factor SWI5Cytoplasm 3.30.160.60 47 27 61 1.91 3.10
1yuiA00 76.18 Drosophila melanogasterPositive regulation of transcription, DNA-dependentTranscription factor GAGACentromeric heterochromatinProtein heterodimerization activity 3.30.160.60 54 20 53 2.48 4.62
1bbgA00 74.85 Pollen allergen Amb t 5Ambrosia trifida 3.30.160.80 40 3 57 2.14 3.72
3c6mC01 71.20 Spermine synthaseArginine and proline metabolismSpermine synthase [EC:2.5.1.22]Glutathione metabolismMetabolic pathways 3.30.160.110 44 10 65 3.06 4.64
1b69A00 68.93 Transposase from transposon Tn916Enterococcus faecalis 3.30.160.60 69 3 42 1.70 4.04
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2adrA01
RSFVCEVCTRAFARQEHLKRHYRSHTNEK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2adrA01
RSFVCEVCTRAFARQEHLKRHYRSHTNEK
BLAST against CATH

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Domain History Events (4)

Update comment by auto on 16 Oct 2007 19:44

Around September/October 2007, this domain was renamed from "2adr001" to "2adrA01" as part of the work to deal with the remediation of the PDB (see http://remediation.wwpdb.org). Please see ticket:207 or wiki:Remediation on the CATH Trac system for more details.

Set cath from cathlist by auto on 05 Mar 2006 19:01

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:01

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"