CATH Domain: 2ab5A02 XML data for domain: 2ab5A02

Molscript image for 2ab5A02
2ab5A02
PDB coordinates for domain 2ab5A02

PDB 2ab5, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.28 Endonuclease I-creI
3.10.28.10 Homing endonucleases Gene3D
3.10.28.10.1
3.10.28.10.1.1
3.10.28.10.1.1.1
3.10.28.10.1.1.1.1
3.10.28.10.1.1.1.1.1

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Segment boundaries for domain 2ab5A02

Chopping figure for domain 2ab5A02
DomainStart PDB ResidueStop PDB Residue
2ab5A01 257 383
2ab5A02 384 517

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.10.28.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3c0wA02 75.24 Endonuclease activity[EC:3.1.-.-]Saccharomyces cerevisiaeIntron-encoded endonuclease I-SceIMitochondrion 3.10.28.10 103 8 75 3.74 4.96
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2ab5A02
RPIKPFNTTEDILNKNYFSSWLIGFFEAKSCFSIYKPNKKKTASFEVSNNNEVLAIKSYLKINNNIYNEFNNSKTTKSIN
DIKNVVFINNNPIKLLGYKKLQYLLFLKDLRTITKYNNYFKIPSKY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ab5A02
RPIKPFNTTEDILNKNYFSSWLIGFFEAKSCFSIYKPXNKKXKTASFEVSXNNNXEVXLAIKSYLKINNNIYXNEFNNSK
XTTKSINDIKNVVXFINNNPIKLLGYKKLQYLLFLKDLRTITKYNNYFKIPSKY
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Nov 2006 18:34

Assigning to "3.10.28.10" based on similarity with "1p8kZ02"

Flow stage update by auto on 28 Nov 2006 18:22

No in_process hits for Domain "2ab5A02" ready to be processed

Flow stage update by auto on 28 Nov 2006 18:22

NW result present for Domain "2ab5A02"

Flow stage update by auto on 28 Nov 2006 18:22

All required files are present for Domain "2ab5A02"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "2ab5A02"

Insertion by cuff on 17 Nov 2006 18:41

nice batch of choppings :)