CATH Domain: 2ab0A00 XML data for domain: 2ab0A00

Molscript image for 2ab0A00
2ab0A00
PDB coordinates for domain 2ab0A00

PDB 2ab0, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.880 Gene3D
3.40.50.880.2
3.40.50.880.2.1
3.40.50.880.2.1.1
3.40.50.880.2.1.1.1
3.40.50.880.2.1.1.1.1

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Segment boundaries for domain 2ab0A00

Chopping figure for domain 2ab0A00
DomainStart PDB ResidueStop PDB Residue
2ab0A00 2 196

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.880.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1oi4A00 87.05 Protease I [EC:3.2.-.-]Response to pHResponse to heatProtein yhbOEscherichia coli K-12 3.40.50.880 191 21 85 1.96 2.29
3cneA00 84.69 Putative protease IBacteroides thetaiotaomicron 3.40.50.880 167 18 82 2.30 2.80
3bhnA00 83.76 ThiJ/PfpI domain proteinShewanella loihica PV-4 3.40.50.880 196 14 88 3.06 3.45
1u9cA00 83.71 Geobacillus kaustophilusHypothetical conserved protein 3.40.50.880 220 22 76 2.62 3.43
2fexA00 82.99 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.880 172 22 84 2.92 3.45
1vhqA00 82.75 Isoprenoid biosynthetic processPositive regulation of isoprenoid metabolic processProtein bindingEscherichia coli K-12Enhancing lycopene biosynthesis protein 2 3.40.50.880 209 17 75 2.51 3.34
1qvzA00 81.00 Probable chaperone protein HSP31Soluble fractionSaccharomyces cerevisiaeProtein binding 3.40.50.880 231 16 70 2.62 3.71
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2ab0A00
SASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAEC
FRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTA
IDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2ab0A00
MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAE
CFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGT
AIDFGLKIIDLLVGREKAHEVASQLVMAAGIYNYYEQLEHHHHHH
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 28 Nov 2006 18:34

Assigning to "3.40.50.880" based on similarity with "1pdvA00"

Flow stage update by auto on 28 Nov 2006 18:22

No in_process hits for Domain "2ab0A00" ready to be processed

Flow stage update by auto on 28 Nov 2006 18:22

NW result present for Domain "2ab0A00"

Flow stage update by auto on 28 Nov 2006 18:22

All required files are present for Domain "2ab0A00"

Flow stage update by auto on 28 Nov 2006 18:21

Beginning processing for Domain "2ab0A00"

Insertion by cuff on 17 Nov 2006 18:41

nice batch of choppings :)