CATH Domain: 2a1uA01 XML data for domain: 2a1uA01

Molscript image for 2a1uA01
2a1uA01
PDB coordinates for domain 2a1uA01

PDB 2a1u, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.620 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 Gene3D
3.40.50.620.20
3.40.50.620.20.1
3.40.50.620.20.1.1
3.40.50.620.20.1.1.1
3.40.50.620.20.1.1.1.1

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Segment boundaries for domain 2a1uA01

Chopping figure for domain 2a1uA01
DomainStart PDB ResidueStop PDB Residue
2a1uA01 19 204
2a1uA02 205 333

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.620.20.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3fetA00 83.64 Electron transfer flavoprotein alpha subunitThermoplasma acidophilumElectron transfer flavoprotein subunit alpha related protein 3.40.50.620 162 15 84 2.56 3.01
1efvB00 78.71 Mitochondrial matrixElectron transfer flavoprotein subunit betaHomo sapiensElectron carrier activity 3.40.50.620 252 12 72 2.88 3.97
1o97C00 77.74 Methylophilus methylotrophusElectron transfer flavoprotein subunit beta 3.40.50.620 251 16 70 2.89 4.10
2pfsA01 74.56 Universal stress protein (Usp)Nitrosomonas europaeaUniversal stress protein A 3.40.50.620 114 14 53 2.40 4.46
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|2a1uA01
FQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILA
TQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAAT
SGGSASSEKASSTSPVEISEWLDQKL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|2a1uA01
FQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILA
TQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAAT
SGGSASSEKASSTSPVEISEWLDQKL
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 21:26

Assigning to "3.40.50.620" based on similarity with "1efvA02" (NWSI: 99.4623655913979, NWO: 100, SPS: 97.44, SPO: 99, RMSD: 0.41)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "2a1uA01"

Flow stage update by auto on 28 Apr 2006 17:48

All required files are present for Domain "2a1uA01"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "2a1uA01"

Insertion by auto on 10 Mar 2006 14:29

Final ChopClose added based on similarity with "1efvA" [LEE: 2, LME: 0, MR: 0, LG: 2, SS: 96.63, SI: 99.6825396825397, SO: 94.5945945945946]