CATH Domain: 1zymA01 XML data for domain: 1zymA01

Molscript image for 1zymA01
1zymA01
PDB coordinates for domain 1zymA01

PDB 1zym, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.50 3-Layer(bba) Sandwich
3.50.30 Glucose Oxidase; domain 1
3.50.30.10 Phosphohistidine domains of PEP-utilising enzymes Gene3D
3.50.30.10.2
3.50.30.10.2.1
3.50.30.10.2.1.1
3.50.30.10.2.1.1.1
3.50.30.10.2.1.1.1.1

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Segment boundaries for domain 1zymA01

Chopping figure for domain 1zymA01
DomainStart PDB ResidueStop PDB Residue
1zymA01 3 20
1zymA01 147 249
1zymA02 21 146

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.50.30.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2olsA03 81.42 Neisseria meningitidis serogroup BPhosphoenolpyruvate synthasePyruvate, water dikinase [EC:2.7.9.2]Pyruvate metabolismMetabolic pathways 3.50.30.10 87 27 70 3.21 4.57
2hi6A00 81.06 Hypothetical proteinArchaeoglobus fulgidusUPF0107 protein AF_0055 3.50.30.10 132 15 76 3.13 4.09
1zl0A02 76.54 Pseudomonas aeruginosaMuramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]Murein tetrapeptide carboxypeptidase 3.50.30.60 138 11 71 3.36 4.68
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1zymA01
SGILASPGIAFGKALLLKIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSV
TSQVKNDDYLILDAVNNQVYVNPTNEVIDKMRAVQEQVASE
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1zymA01
MISGILASPGIAFGKALLLKIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTG
SVTSQVKNDDYLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKD
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:30

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"