CATH Domain: 1zx0D00 XML data for domain: 1zx0D00

Molscript image for 1zx0D00
1zx0D00
PDB coordinates for domain 1zx0D00

PDB 1zx0, Chain D, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.150 Vaccinia Virus protein VP39 Gene3D
3.40.50.150.12
3.40.50.150.12.1
3.40.50.150.12.1.1
3.40.50.150.12.1.1.1
3.40.50.150.12.1.1.1.1

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Segment boundaries for domain 1zx0D00

Chopping figure for domain 1zx0D00
DomainStart PDB ResidueStop PDB Residue
1zx0D00 18 236

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.40.50.150.12.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1dusA00 78.20 Methanocaldococcus jannaschiiProtein MJ0882 3.40.50.150 192 8 80 3.63 4.52
1sqgA04 77.52 Tyrosine metabolismSelenoamino acid metabolismEscherichia coli K12Histidine metabolismSun protein 3.40.50.150 198 13 78 3.68 4.69
1qyrA01 76.91 Tyrosine metabolismSelenoamino acid metabolismEscherichia coli K12Histidine metabolismAndrogen and estrogen metabolism 3.40.50.150 184 10 75 3.62 4.80
1g8aA02 76.83 Pyrococcus horikoshiiFibrillarin-like rRNA/tRNA 2'-O-methyltransferaseFibrillarin-like pre-rRNA processing protein 3.40.50.150 176 15 75 3.48 4.62
1uirA02 76.50 Urea cycle and metabolism of amino groupsMethionine metabolismBeta-Alanine metabolismThermus thermophilus HB8Spermidine synthase 3.40.50.150 253 13 66 3.11 4.66
1qamA01 75.78 Bacillus subtilisRRNA (adenine-N6-)-methyltransferaseRRNA adenine N-6-methyltransferase 3.40.50.150 157 7 71 3.42 4.80
1af7A02 74.63 Bacterial chemotaxis - GeneralChemotaxis protein methyltransferase CheRSalmonella typhimuriumChemotaxis protein methyltransferase 3.40.50.150 194 9 66 3.16 4.74
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1zx0D00
PAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQ
RLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGEL
MKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTKG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1zx0D00
PAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQ
RLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGEL
MKSKYSDITIMFEETQVPALLEAGFRRENIRTEVMALVPPADCRYYAFPQMITPLVTKG
BLAST against CATH

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Domain History Events (8)

Domain assigned by auto on 11 Jan 2007 07:41

Assigning to "3.40.50.150" based on similarity with "1zx0A00"

Flow stage update by auto on 11 Jan 2007 07:39

No in_process hits for Domain "1zx0D00" ready to be processed

Update comment by auto on 11 Jan 2007 03:37

Domain "1zx0D00" hits Domain "1zx0A00" (100% over 92.7966101694915%) which is currently in process

Flow stage update by auto on 11 Jan 2007 03:34

Domain "1zx0D00" hits Domain "1zx0A00" (100% over 92.7966101694915%) which is currently in process

Flow stage update by auto on 11 Jan 2007 03:34

NW result present for Domain "1zx0D00"

Flow stage update by auto on 22 Dec 2006 19:34

All required files are present for Domain "1zx0D00"

Flow stage update by auto on 22 Dec 2006 03:40

Beginning processing for Domain "1zx0D00"

Insertion by auto on 22 Dec 2006 03:31

Final ChopClose added based on similarity with "1zx0B"