CATH Domain: 1zq6A01 XML data for domain: 1zq6A01

Molscript image for 1zq6A01
1zq6A01
PDB coordinates for domain 1zq6A01

PDB 1zq6, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1370 Gene3D
3.40.50.1370.3
3.40.50.1370.3.1
3.40.50.1370.3.1.1
3.40.50.1370.3.1.1.1
3.40.50.1370.3.1.1.1.8

[top]
Segment boundaries for domain 1zq6A01

Chopping figure for domain 1zq6A01
DomainStart PDB ResidueStop PDB Residue
1zq6A01 3 150
1zq6A01 322 334
1zq6A02 151 321

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.1370.3.1.1.1.8 (SIMAX score < 5)

[1]
Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2ef0A01 90.37 Thermus thermophilus HB8Arginine and proline metabolismOrnithine carbamoyltransferaseOrnithine carbamoyltransferase [EC:2.1.3.3]Metabolic pathways 3.40.50.1370 144 37 86 1.32 1.53
1js1Y01 89.43 N-acetylornithine carbamoyltransferaseBacteroides thetaiotaomicronN-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11] 3.40.50.1370 164 32 95 2.16 2.26
1ml4A01 88.05 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Pyrococcus abyssiAspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolism 3.40.50.1370 149 24 86 2.10 2.43
3d6nB01 85.60 Pyrimidine metabolismAspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]Aspartate carbamoyltransferaseAlanine, aspartate and glutamate metabolismMetabolic pathways 3.40.50.1370 147 23 85 2.92 3.41
8abpA01 74.94 ABC transportersL-arabinose-binding periplasmic proteinL-arabinose transport system substrate-binding proteinEscherichia coli K-12 3.40.50.2300 138 5 61 2.97 4.83
[1]
Displaying entries 1 to 5 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1zq6A01
LKHFLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFN
LGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETITHPCRLHVQKAIMAAL
V
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1zq6A01
LKHFLNTQDWSRAELDALLTQAALFKRNKLGSELKGKSIALVFFNPSMRTRTSFELGAFQLGGHAVVLQPGKDAWPIEFN
LGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMETITHPCRLHVQKAIMAAL
VGQSRP
BLAST against CATH

[top]
Domain History Events (9)

Domain assigned by auto on 15 Aug 2007 01:51

Assigning to "3.40.50.1370" based on similarity with "1zq8A01"

Flow stage update by auto on 15 Aug 2007 01:29

No in_process hits for Domain "1zq6A01" ready to be processed

Update comment by auto on 15 Aug 2007 00:01

Domain "1zq6A01" hits Domain "1zq8A01" (100% over 100%) which is currently in process

Update comment by auto on 14 Aug 2007 22:47

Domain "1zq6A01" hits Domain "1yh0A01" (100% over 100%) which is currently in process

Flow stage update by auto on 20 Jul 2007 19:34

Domain "1zq6A01" hits Domain "1zq2A01" (100% over 100%) which is currently in process

Flow stage update by auto on 20 Jul 2007 19:34

NW result present for Domain "1zq6A01"

Flow stage update by auto on 16 Jul 2007 22:37

All required files are present for Domain "1zq6A01"

Flow stage update by auto on 14 Jul 2007 21:06

Beginning processing for Domain "1zq6A01"

Insertion by auto on 14 Jul 2007 20:11

Final ChopClose added based on similarity with "1yh0A"