CATH Domain: 1zpgB00 XML data for domain: 1zpgB00

Molscript image for 1zpgB00
1zpgB00
PDB coordinates for domain 1zpgB00

PDB 1zpg, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.800 Arginase; Chain A
3.40.800.10 Gene3D
3.40.800.10.1
3.40.800.10.1.1
3.40.800.10.1.1.2
3.40.800.10.1.1.2.6
3.40.800.10.1.1.2.6.1

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Segment boundaries for domain 1zpgB00

Chopping figure for domain 1zpgB00
DomainStart PDB ResidueStop PDB Residue
1zpgB00 6 319

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.800.10.1.1.2.6.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gq6B00 86.00 Streptomyces clavuligerusProclavaminate amidinohydrolase 3.40.800.10 301 24 87 3.20 3.68
1wohA00 84.86 Agmatinase, putativeAgmatinase [EC:3.5.3.11]Arginine and proline metabolismDeinococcus radioduransMetabolic pathways 3.40.800.10 303 22 85 3.16 3.71
1xfkA00 82.74 Histidine metabolismMetabolic pathwaysFormiminoglutamase [EC:3.5.3.8]Vibrio choleraeFormimidoylglutamase 3.40.800.10 324 17 84 3.69 4.35
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1zpgB00
KPIEIIGAPFSKGPRGGVEKGPAALRKAGLVEKLKETEYNVRDHGDLAFVDVPNDSPFQIVKNPRSVGKANEQLAAVVAE
TQKNGTISVVLGGDHSMAIGSISGHARVHPDLAVIWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWVT
PAISAKDIVYIGLRDVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGT
PVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNPTLGKTPEEVTRTVNTAVALTLSAFGTKREGNHKPETDYL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1zpgB00
KPIEIIGAPFSKGXPRGGVEKGPAALRKAGLVEKLKETEYNVRDHGDLAFVDVPNDSPFQIVKNPRSVGKANEQLAAVVA
ETQKNGTISVVLGGDHSMAIGSISGHARVHPDLAVIWVDAHTDINTPLTTSSGNLAGQPVAFLLKELKGKFPDVPGFSWV
TPAISAKDIVYIGLRDVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATG
TPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNPTLGKTPEEVTRTVNTAVALTLSAFGTKREGNHKPETDYL
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 21:20

Assigning to "3.40.800.10" based on similarity with "1t5gC00" (NWSI: 99.6815286624204, NWO: 100, SPS: 97.62, SPO: 99, RMSD: 0.25)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "1zpgB00"

Flow stage update by auto on 28 Apr 2006 17:48

All required files are present for Domain "1zpgB00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1zpgB00"

Insertion by auto on 10 Mar 2006 09:31

Final ChopClose added based on similarity with "1t5fA" [LEE: 0, LME: 0, MR: 0, LG: 1, SS: 98.20, SI: 99.6815286624204, SO: 100]