CATH Domain: 1zpdA01 XML data for domain: 1zpdA01

Molscript image for 1zpdA01
1zpdA01
PDB coordinates for domain 1zpdA01

PDB 1zpd, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.970 Gene3D
3.40.50.970.15
3.40.50.970.15.1
3.40.50.970.15.1.1
3.40.50.970.15.1.1.1
3.40.50.970.15.1.1.1.5

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Segment boundaries for domain 1zpdA01

Chopping figure for domain 1zpdA01
DomainStart PDB ResidueStop PDB Residue
1zpdA01 2 186
1zpdA02 188 350
1zpdA03 355 548

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.40.50.970.15.1.1.1.5 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ozhD01 89.04 Acetolactate synthase, catabolicKlebsiella pneumoniae 3.40.50.970 176 18 91 1.84 2.01
1t9bB01 88.92 Acetolactate synthase I/II/III large subunit [EC:2.2.1.6]Metabolic pathwaysValine, leucine and isoleucine biosynthesisButanoate metabolismFlavin adenine dinucleotide binding 3.40.50.970 185 18 91 2.12 2.31
2ihuA01 88.25 Streptomyces clavuligerusCarboxyethylarginine synthase 3.40.50.970 185 17 94 2.48 2.62
1yd7A00 82.71 Pyrococcus furiosus2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]Citrate cycle (TCA cycle)2-keto acid:ferredoxin oxidoreductase subunit alphaMetabolic pathways 3.40.50.970 162 12 79 2.69 3.39
2ozlB01 80.03 Pyruvate dehydrogenase (acetyl-transferring) activityPyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]Citrate cycle (TCA cycle)Pyruvate dehydrogenase E1 component subunit beta, mitochondrialTricarboxylic acid cycle 3.40.50.970 193 11 87 4.07 4.68
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1zpdA01
SYTVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAKGAAAAVVTYSVGALSAF
DAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKKP
VYLEIACNIASMPCAAPGPASALFN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1zpdA01
MSYTVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNELNCGFSAEGYARAKGAAAAVVTYSVGALSA
FDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKK
PVYLEIACNIASMPCAAPGPASALFN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:18

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:52

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"