CATH Domain: 1zodA01 XML data for domain: 1zodA01

Molscript image for 1zodA01
1zodA01
PDB coordinates for domain 1zodA01

PDB 1zod, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.1150 Aspartate Aminotransferase, domain 1
3.90.1150.10 Aspartate Aminotransferase, domain 1 Gene3D
3.90.1150.10.10
3.90.1150.10.10.1
3.90.1150.10.10.1.1
3.90.1150.10.10.1.1.1
3.90.1150.10.10.1.1.1.1

Segment boundaries for domain 1zodA01

Chopping figure for domain 1zodA01
DomainStart PDB ResidueStop PDB Residue
1zodA01 29 60
1zodA01 325 433
1zodA02 61 324

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 3.90.1150.10.10.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1sffA01 89.85 Valine, leucine and isoleucine degradationPropanoate metabolismMetabolic pathwaysButanoate metabolismBeta-Alanine metabolism 3.90.1150.10 165 33 84 1.38 1.64
2oatA01 88.69 Ornithine--oxo-acid transaminase [EC:2.6.1.13]Arginine and proline metabolismOrnithine-oxo-acid transaminase activityVisual perceptionHomo sapiens 3.90.1150.10 154 29 82 1.52 1.84
1ohvA01 86.80 Sus scrofaMitochondrial matrixSuccinate-semialdehyde dehydrogenase bindingProtein homodimerization activityPyridoxal phosphate binding 3.90.1150.10 166 23 76 1.47 1.92
3bv0A01 85.21 Biotin metabolismMetabolic pathwaysAdenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseMycobacterium tuberculosis 3.90.1150.10 151 17 83 2.20 2.64
1fc4A02 85.18 Glycine, serine and threonine metabolismLigase activityMetal ion binding2-amino-3-ketobutyrate coenzyme A ligaseGlycine C-acetyltransferase [EC:2.3.1.29] 3.90.1150.10 133 13 85 2.68 3.15
1s0aA01 84.55 Biotin metabolismMetabolic pathwaysAdenosylmethionine-8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseEscherichia coli K-12 3.90.1150.10 158 16 80 2.19 2.72
2hoyA01 82.85 Porphyrin and chlorophyll metabolismGlutamate-1-semialdehyde 2,1-aminomutaseGlutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]Synechococcus elongatus PCC 6301Metabolic pathways 3.90.1150.10 178 17 75 3.18 4.22
3ftbA01 80.88 Tyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathwaysPhenylalanine metabolism 3.90.1150.10 112 12 73 2.74 3.75
1p3wA01 80.24 Thiamine metabolismCysteine desulfurase activitySelenocysteine lyase activityCysteine desulfuraseIron-sulfur cluster assembly 3.90.1150.10 121 13 72 2.58 3.57
3k40A03 79.86 Aromatic-L-amino-acid decarboxylase activityDopamine biosynthetic process from tyrosineAromatic-L-amino-acid decarboxylaseDevelopmental pigmentationSerotonin biosynthetic process from tryptophan 3.90.1150.10 99 6 65 2.15 3.30
1jg8A02 79.56 Thermotoga maritimaThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysL-allo-threonine aldolase 3.90.1150.10 96 12 65 3.12 4.73
1uu1B01 79.16 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.90.1150.10 131 9 69 3.11 4.47
1eg5B01 79.10 Thermotoga maritimaThiamine metabolismCysteine desulfurase [EC:2.8.1.7]Aminotransferase, class V 3.90.1150.10 106 13 65 2.82 4.32
2qmaA02 78.38 Diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]Vibrio parahaemolyticusGlycine, serine and threonine metabolismDiaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylaseMetabolic pathways 3.90.1150.10 122 6 78 3.56 4.52
1uu2B01 77.97 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.90.1150.10 117 10 70 3.02 4.26
Displaying entries 1 to 15 (page 1 of 1)


Domain ATOM Sequence

>pdb|1zodA01
IERAKGSFVYDADGRAILDFTSGQMSAVLGHCGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTK
EPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERAL    

Domain COMBS Sequence

>pdb|1zodA01
IERAKGSFVYDADGRAILDFTSGQMSAVLGHCGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTK
EPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERAL    

Domain History Events (6)

Domain assigned by auto on 01 Nov 2006 14:56

Assigning to "3.90.1150.10" based on similarity with "1d7rA01"

Flow stage update by auto on 18 Oct 2006 05:24

No in_process hits for Domain "1zodA01" ready to be processed

Flow stage update by auto on 18 Oct 2006 05:24

NW result present for Domain "1zodA01"

Flow stage update by auto on 16 Oct 2006 16:34

All required files are present for Domain "1zodA01"

Flow stage update by auto on 16 Oct 2006 05:45

Beginning processing for Domain "1zodA01"

Insertion by auto on 16 Oct 2006 04:40

Final ChopClose added based on similarity with "1dka0"