CATH Domain: 1zkcB01 XML data for domain: 1zkcB01

Molscript image for 1zkcB01
1zkcB01
PDB coordinates for domain 1zkcB01

PDB 1zkc, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.100 Cyclophilin
2.40.100.10 Cyclophilin Gene3D
2.40.100.10.4
2.40.100.10.4.1
2.40.100.10.4.1.1
2.40.100.10.4.1.1.1
2.40.100.10.4.1.1.1.1

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Segment boundaries for domain 1zkcB01

Chopping figure for domain 1zkcB01
DomainStart PDB ResidueStop PDB Residue
1zkcB01 279 438
1zkcB02 439 457

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.40.100.10.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3bo7B00 93.40 Peptidyl-prolyl cis-trans isomerase, cyclophilin-typeToxoplasma gondii 2.40.100.10 166 51 95 2.04 2.14
3bkpA00 92.10 Toxoplasma gondiiCyclophilin 2.40.100.10 175 41 88 0.90 1.02
1mzwA00 91.03 SpliceosomePeptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]Cyclosporin A bindingPeptidyl-prolyl cis-trans isomerase activityProtein binding 2.40.100.10 173 41 88 1.01 1.14
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1zkcB01
SGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNL
SHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPY
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1zkcB01
SGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNL
SHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDPY
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 09 Sep 2007 02:24

Assigning to "2.40.100.10" based on similarity with "1xwnA00"

Flow stage update by auto on 09 Sep 2007 02:08

No in_process hits for Domain "1zkcB01" ready to be processed

Flow stage update by auto on 09 Sep 2007 02:08

NW result present for Domain "1zkcB01"

Flow stage update by auto on 08 Sep 2007 10:04

All required files are present for Domain "1zkcB01"

Flow stage update by auto on 07 Sep 2007 15:15

Beginning processing for Domain "1zkcB01"

Insertion by cuff on 07 Sep 2007 10:56

nice chopping