CATH Domain: 1z6bE00 XML data for domain: 1z6bE00

Molscript image for 1z6bE00
1z6bE00
PDB coordinates for domain 1z6bE00

PDB 1z6b, Chain E, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.129 Thiol Ester Dehydrase; Chain A
3.10.129.10 Gene3D
3.10.129.10.21
3.10.129.10.21.1
3.10.129.10.21.1.1
3.10.129.10.21.1.1.1
3.10.129.10.21.1.1.1.2

Segment boundaries for domain 1z6bE00

Chopping figure for domain 1z6bE00
DomainStart PDB ResidueStop PDB Residue
1z6bE00 84 228

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 3.10.129.10.21.1.1.1.2 (SIMAX score < 5)

Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1mkaA00 86.78 Fatty acid biosynthesisMetabolic pathways3-hydroxydecanoyl-[acyl-carrier-protein] dehydrataseFatty acid biosynthetic process3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60] 3.10.129.10 171 23 80 1.57 1.95
1ixlA00 85.36 Putative uncharacterized protein PH1136Pyrococcus horikoshii 3.10.129.10 127 14 86 3.42 3.97
2pimA00 84.64 Ralstonia eutropha JMP134Phenylacetic acid degradation-related protein 3.10.129.10 127 10 89 3.88 4.35
2fs2B00 84.22 Acyl-coenzyme A thioesterase paaIPhenylacetic acid degradation proteinEscherichia coli K-12 3.10.129.10 134 10 86 3.33 3.83
2qwzA01 83.35 Phenylacetic acid degradation-related proteinRuegeria sp. TM1040 3.10.129.10 128 11 86 3.00 3.48
1zkiA00 82.99 Pseudomonas aeruginosaPhenylacetic acid degradation proteinPutative uncharacterized protein 3.10.129.10 118 11 82 2.63 3.18
3b7kC02 82.94 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 110 10 72 2.39 3.30
2hboA01 82.35 Caulobacter vibrioidesPutative uncharacterized protein 3.10.129.10 126 9 81 3.04 3.75
3b7kA02 82.18 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 121 9 74 3.57 4.78
2prxA00 82.09 Shewanella loihica PV-4Thioesterase superfamily protein 3.10.129.10 108 8 76 2.79 3.63
3b7kB01 81.66 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 140 11 70 2.37 3.39
1tbuB00 81.56 Palmitoyl-CoA hydrolase [EC:3.1.2.2]Protein bindingBiosynthesis of unsaturated fatty acidsPeroxisomal acyl-coenzyme A thioester hydrolase 1Peroxisome 3.10.129.10 98 10 69 2.46 3.54
1njkA00 80.40 Long-chain acyl-CoA thioesterase tesCAcyl-CoA thioesterase activityThioesterase III [EC:3.1.2.-]Fatty acid beta-oxidationEscherichia coli K-12 3.10.129.10 130 15 70 3.00 4.27
2oiwA00 80.02 Geobacillus kaustophilusHypothetical conserved protein 3.10.129.10 129 5 69 2.37 3.41
1s9cL01 78.80 Sterol bindingPeroxisomeEstradiol 17-beta-dehydrogenase activityPrimary bile acid biosynthesisSterol transporter activity 3.10.129.10 140 6 73 3.15 4.28
2hljA01 78.61 Pseudomonas putida KT2440Putative uncharacterized protein 3.10.129.10 132 6 73 3.22 4.40
Displaying entries 1 to 16 (page 1 of 1)


Domain ATOM Sequence

>pdb|1z6bE00
DTSIDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSNNL
FLFAGVDGVRWKKPVLPGDTLTMQANLISFKGIAKLSGVGYVNGKVVINISEMTFAL    

Domain COMBS Sequence

>pdb|1z6bE00
GSHMPNYDTSIDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGIL
CLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFALSK    

Domain History Events (10)

Domain assigned by auto on 05 Nov 2006 17:23

Assigning to "3.10.129.10" based on similarity with "1z6bB00"

Flow stage update by auto on 05 Nov 2006 17:22

No in_process hits for Domain "1z6bE00" ready to be processed

Update comment by auto on 05 Nov 2006 13:26

Domain "1z6bE00" hits Domain "1z6bC00" (100% over 100%) which is currently in process

Update comment by auto on 05 Nov 2006 09:24

Domain "1z6bE00" hits Domain "1zhgB00" (100% over 90.2597402597403%) which is currently in process

Update comment by auto on 05 Nov 2006 05:23

Domain "1z6bE00" hits Domain "1z6bB00" (100% over 100%) which is currently in process

Flow stage update by auto on 05 Nov 2006 05:22

Domain "1z6bE00" hits Domain "1z6bB00" (100% over 100%) which is currently in process

Flow stage update by auto on 05 Nov 2006 05:22

NW result present for Domain "1z6bE00"

Flow stage update by auto on 02 Nov 2006 14:23

All required files are present for Domain "1z6bE00"

Flow stage update by auto on 02 Nov 2006 03:15

Beginning processing for Domain "1z6bE00"

Insertion by auto on 02 Nov 2006 01:26

Final ChopClose added based on similarity with "1z6bB"