CATH Domain: 1yyhB00

There are 15 matching structural neighberhood comparisons for CATH ID 1.25.40.20.3.1.1.1.1 (SIMAX score < 5)

Match Depth	Match	SSAP score	Match Keywords	Match Superfamily	Length	Sequence Id	Overlap	RMSD	SIMAX
	2f8yB00	96.06	Negative regulation of osteoblast differentiationNegative regulation of BMP signaling pathwayPrion diseasesNegative regulation of gene-specific transcriptionNucleus	1.25.40.20	209	100	90	0.42	0.46
	1awcB00	88.21	Mus musculusGA-binding protein subunit beta-1	1.25.40.20	153	24	80	1.32	1.63
	1uohA00	87.92	26S proteasome non-ATPase regulatory subunit 10CytoplasmProteasome regulatory particleActin cytoskeletonHomo sapiens	1.25.40.20	223	27	84	1.60	1.90
	1k1aA00	86.52	Transcription factor bindingBcl3/NF-kappaB2 complexNegative regulation of apoptosisCytoplasmI-kappaB kinase/NF-kappaB cascade	1.25.40.20	228	27	82	2.38	2.89
	2dznA00	86.30	26S proteasome non-ATPase regulatory subunit 10Proteasome regulatory particle assemblyProbable 26S proteasome regulatory subunit p28NucleusSaccharomyces cerevisiae	1.25.40.20	226	22	82	2.37	2.88
	1n0rA00	85.85		1.25.40.20	126	38	66	1.58	2.37
	1ympA00	85.57	Negative regulation of gene-specific transcriptionNeural tube developmentNeurogenic locus notch homolog protein 1Regulation of somitogenesisRegulation of epithelial cell proliferation involved in prostate gland development	1.25.40.20	131	22	69	1.40	2.02
	1iknD00	85.55	Cytoplasmic sequestering of NF-kappaBNeurotrophin signaling pathwayT cell receptor signaling pathwayApoptosisAdipocytokine signaling pathway	1.25.40.20	215	24	86	2.28	2.65
	3c5rA00	84.93	BRCA1-associated RING domain protein 1Protein homodimerization activityRNA bindingBRCA1-A complexNegative regulation of apoptosis	1.25.40.20	125	27	66	1.46	2.21
	1ycsB01	82.42	Induction of apoptosisNF-kappaB bindingNegative regulation of cell cycleHomo sapiensApoptosis-stimulating of p53 protein 2	1.25.40.20	128	20	66	2.24	3.39
	3ehrA02	82.07	Osteoclast-stimulating factor 1OssificationIdentical protein bindingHomo sapiensSignal transduction	1.25.40.20	114	24	59	1.58	2.64
	1n0qB00	81.26		1.25.40.20	93	32	46	1.05	2.26
	1bi7B00	81.18	Bladder cancerSenescencePathways in cancerNon-small cell lung cancerProtein binding	1.25.40.20	125	21	65	2.14	3.26
	1wdyA00	80.75	2-5A-dependent ribonucleaseRibonuclease L [EC:3.1.26.-]Homo sapiens	1.25.40.20	285	30	65	2.99	4.53
	1n11A00	77.27	Structural constituent of cytoskeletonMaintenance of epithelial cell apical/basal polarityEnzyme bindingHomo sapiensAnkyrin-1	1.25.40.20	404	28	46	1.19	2.56

>pdb|1yyhB00
RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL
AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA
NRDITDHMDRLPRDIAQERMHHDIVRLLD    

>pdb|1yyhB00
RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL
AVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA
NRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHHHHH