CATH Domain: 1ys1X00 XML data for domain: 1ys1X00

Molscript image for 1ys1X00
1ys1X00
PDB coordinates for domain 1ys1X00

PDB 1ys1, Chain X, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1820 Gene3D
3.40.50.1820.1
3.40.50.1820.1.1
3.40.50.1820.1.1.1
3.40.50.1820.1.1.1.1
3.40.50.1820.1.1.1.1.1

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Segment boundaries for domain 1ys1X00

Chopping figure for domain 1ys1X00
DomainStart PDB ResidueStop PDB Residue
1ys1X00 1 320

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.1820.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2hihB00 79.80 Staphylococcus hyicusLipase 3.40.50.1820 386 20 71 3.56 4.98
2dsnA00 79.60 Geobacillus zalihaeThermostable lipase 3.40.50.1820 387 17 66 3.12 4.66
1ispA00 76.04 Lipase estABacillus subtilisGlycerolipid metabolismTriacylglycerol lipase [EC:3.1.1.3]Metabolic pathways 3.40.50.1820 179 22 51 2.42 4.67
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ys1X00
ADNYAATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAATGATK
VNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFADFVQGVLAYDPTGLSSTVIAAFVNVFGILTSSSNNTNQDA
LAALKTLTTAQAATYNQNYPSAGLGAPGSCQTGAPTETVGGNTHLLYSWAGTAIQPTISVGGVTGATDTSTIPLVDPANA
LDPSTLALFGTGTVMVNRGSGQNDGVVSKCSALYGQVLSTSYKWNHLDEINQLLGVRGANAEDPVAVIRTHANRLKLAGV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ys1X00
ADNYAATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAATGATK
VNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHRGSEFADFVQGVLAYDPTGLSSTVIAAFVNVFGILTSSSNNTNQDA
LAALKTLTTAQAATYNQNYPSAGLGAPGSCQTGAPTETVGGNTHLLYSWAGTAIQPTISVGGVTGATDTSTIPLVDPANA
LDPSTLALFGTGTVMVNRGSGQNDGVVSKCSALYGQVLSTSYKWNHLDEINQLLGVRGANAEDPVAVIRTHANRLKLAGV
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 20:58

Assigning to "3.40.50.1820" based on similarity with "1ys2X00" (NWSI: 100, NWO: 100, SPS: 99.61, SPO: 100, RMSD: 0.10)

Flow stage update by auto on 28 Apr 2006 17:51

NW result present for Domain "1ys1X00"

Flow stage update by auto on 28 Apr 2006 17:47

All required files are present for Domain "1ys1X00"

Flow stage update by auto on 27 Apr 2006 17:32

Beginning processing for Domain "1ys1X00"

Insertion by auto on 10 Mar 2006 04:10

Final ChopClose added based on similarity with "1hqdA" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 98.07, SI: 99.6875, SO: 100]